Undibacterium sp. YM2: UNDYM_5174
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Entry
UNDYM_5174 CDS
T10101
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
uny Undibacterium sp. YM2
Pathway
uny00300
Lysine biosynthesis
uny00470
D-Amino acid metabolism
uny01100
Metabolic pathways
uny01110
Biosynthesis of secondary metabolites
uny01120
Microbial metabolism in diverse environments
uny01230
Biosynthesis of amino acids
Module
uny_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
UNDYM_5174 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UNDYM_5174 (dapF)
Enzymes [BR:
uny01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
UNDYM_5174 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
BBB69427
UniProt:
A0A809QS07
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All DBs
Position
5644239..5645099
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AA seq
286 aa
AA seq
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MKLKFTKMHGAGNDFVVIDAINQHINFTPAQWRLIADRRFGIGADQILVVERPESQDVDF
RYRIYNADGGEVEQCGNGSRAFVQFVIEKGLTDKSTIRVQTMSGIIEPRMGADGKITVNM
GAPILEAAQVPFNAEGLESRPEGHDSLWPLDINGKQVWISAVSMGNPHAVQVVASVDDFP
VAVDGPLIEHHPRFPRRVNAGFMEVVDRQHIRLRVFERGAGETLACGTGACAAAVAGLRR
GLLDSPVRVSMRGGELSIAWEGEGQPVFLSGPAVTVFEGEINLTET
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcaccaaaatgcatggcgccggtaatgattttgtcgttatcgatgcg
attaaccagcacatcaatttcactcctgcccagtggcggctgattgctgaccgccgcttt
ggcataggagcagaccagatcctggtggtagaacgaccagaaagccaggacgtcgatttt
cgctaccgtatctataacgccgatggtggcgaggtcgaacaatgtggcaatggctcgcgc
gcttttgtgcagtttgtcatcgaaaaaggcctgaccgacaaatcgaccatacgtgtgcag
accatgtccggcatcatagagccgcgcatgggggcagatggcaaaatcacggtcaatatg
ggcgcccccatactggaagcagcgcaggtgccattcaatgccgaaggtctggagtccagg
cctgaaggacatgacagcttgtggccactggacatcaatggcaaacaggtctggatctct
gccgtttccatgggtaatccgcatgcagtgcaggtggtagcctcggtcgatgacttcccg
gtcgctgtcgatggcccgctgatagagcaccatccccgcttcccacgccgcgtcaatgct
ggcttcatggaggttgtggatcgccagcacatacgcctgcgcgtgtttgaacgcggtgcc
ggagaaaccctggcttgtggtaccggtgcctgtgccgctgctgtagctggcctgcgccgg
ggcttgctggatagcccggtacgtgtcagcatgcgcggtggtgaactttccatcgcctgg
gagggtgaaggccagccagtattcctcagcggtccggcagtgaccgtctttgaaggcgaa
attaatttaacagaaacataa
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