Undibacterium sp. YM2: UNDYM_5677
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Entry
UNDYM_5677 CDS
T10101
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
uny Undibacterium sp. YM2
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
uny03009
]
UNDYM_5677 (dbpA)
Enzymes [BR:
uny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UNDYM_5677 (dbpA)
Ribosome biogenesis [BR:
uny03009
]
Prokaryotic type
rRNA helicases
UNDYM_5677 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBB69930
UniProt:
A0A809PU71
LinkDB
All DBs
Position
complement(6191187..6192572)
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AA seq
461 aa
AA seq
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MSESTAFNTLPLSAPMLANLDSLGYKEMTAIQAASLPIILQQQDLIAQAKTGSGKTAAFG
IGMLAKLNPTYFAVQGLVICPTRELADQVANELRRLARTMPNVKIVTLCGGTAMRPQIAS
LEYGAHIVVGTPGRLIDHISRGTVNLKAVQTLVLDEADRMVDMGFYDDIYDIVAATPTRR
QTLLFSATYPDDIRQASEQLLRDPVEIKVESQHAANHIEQMFYLVTPEGRNTAVATLLHH
YQPTSTIAFCNTKIHCRELTEELHAQGISALALHGDLEQRDRDEVLIRFANQSCSVLVAT
DVAARGLDIQTLGAVINVDVSKDTEVHIHRIGRTGRAGEKGLALSLATPGEKKWVKLIEE
YQGESVIWGDIHAIEAGPERDLQAPMMTICIMGGKKDKLRPGDLLGALTADLGLKKEQVG
KINVSEFVTYVAIDRQVAEKTVDRLSRTNIKGRQFRMRIVD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatccaccgccttcaacaccctgccgctatccgctcccatgcttgccaacctg
gacagcctgggctacaaggaaatgacagccatacaggcagccagcctgcccatcatcctg
caacagcaagacctgatcgcccaggccaagacaggtagcggcaagaccgctgcctttggc
ataggcatgctggccaaactcaatcccacttattttgccgtccagggcctggtgatttgc
ccgacgcgtgaactggcggaccaggttgccaatgagttgcgccgcctggccaggaccatg
ccgaacgtcaagatcgtcaccctgtgcggtggcacggccatgcgtccgcagattgcttca
cttgaatatggagcgcacatcgtggtcggcacacctggccgcctgatcgaccatatcagc
cgtggaacggtcaacctcaaagccgtacaaaccctggtgctcgatgaagccgaccgcatg
gtcgacatgggcttttatgatgatatctacgacatcgtcgccgccacgcccacgcgcagg
caaaccctgttgttctcggcaacttatcccgatgatatacgccaggccagcgaacaactg
ctgcgcgacccggtggagatcaaggttgaatcccagcatgccgccaatcacattgagcaa
atgttttacctggtcacgccagaagggcgcaataccgctgtcgccacgctgctgcatcat
taccagccgacatccacgattgccttttgcaacaccaagatacactgccgcgaactgaca
gaagaattgcacgcccagggcatcagcgccctggccctgcatggcgaccttgaacagcgc
gaccgcgacgaggtcctgatacgtttcgccaatcaaagttgctcagtcctcgtcgccacc
gacgtcgccgcccgcggtctcgacatacaaaccctgggtgccgtcatcaatgtcgatgta
tccaaagacaccgaagtccacatccaccgcataggccgcacaggccgcgctggcgaaaaa
ggcctggccctgagcctggctacacccggtgaaaagaagtgggtcaaactgatcgaagaa
tatcagggcgaatccgtcatttggggcgatatccacgcaattgaagcgggcccggaaaga
gacctgcaagccccgatgatgaccatctgcatcatgggcggcaaaaaagacaaactccgc
cccggcgacttactcggcgcgctgacggctgacctgggtttgaaaaaagaacaggtagga
aaaatcaatgtctcggaatttgtcacctacgttgccattgacaggcaagttgcagaaaag
acggtggacaggctgagccgtaccaatatcaagggcaggcagttcaggatgcggattgtt
gattga
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