Undibacterium sp. YM2: UNDYM_5736
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Entry
UNDYM_5736 CDS
T10101
Symbol
Ada
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
uny Undibacterium sp. YM2
Pathway
uny03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
uny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UNDYM_5736 (Ada)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
uny03000
]
UNDYM_5736 (Ada)
03400 DNA repair and recombination proteins [BR:
uny03400
]
UNDYM_5736 (Ada)
Enzymes [BR:
uny01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
UNDYM_5736 (Ada)
Transcription factors [BR:
uny03000
]
Prokaryotic type
Helix-turn-helix
AraC family
UNDYM_5736 (Ada)
DNA repair and recombination proteins [BR:
uny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UNDYM_5736 (Ada)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BBB69989
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Position
6270421..6271983
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AA seq
520 aa
AA seq
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MEQQIPTMQGKAQAAVPPDATSLMLTEASEGLTQKQCYYRALAAKDSRFDGVFFTGVKTT
GVYCRPVCGVKTPRESSCEFFSSAAAAEAAGFRPCLRCRPELAPYAIQQNLAHAIWQRIA
DGALNETDIESFSEQVGLSSRQLRRVMLQEFGVTPVELAQTQRLLFAKKLLQETQLGMAE
IAFAAGFGSVRRFNALFSERYQMAPGSIRRAADSAGEGVCLKLAYRPPYAWDAVITYLAG
RAMPGLEAVIDEKGGKAYVRSVQMEGLEGWLKVAHLPAKQQLSLQVSPSLAPVLMPLMAR
VRQQFDLEANPAVIQSHLQTDSLLAGQILRTPGMRVPGAFNSFELAIRAVLGQQVSVAGA
TTVAGRLVNRFGQPVLTPFAAVTHHFPSPQTIVGLSIDQLAGIGIPGARAATLQNIARFA
LDGGLQRQLAASSDEMVARLKTVKGIGEWTAQYIAMRALRFSDAFPAGDLGLQKAAALLA
TPATPASERLTEKQLLAVAQPWAPWRAYAALLLWQSLSQQ
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcagatacctaccatgcagggcaaagctcaggctgcagtgccgcccgatgcg
accagcctgatgctgactgaggccagtgagggtttgacgcaaaagcaatgttattaccgc
gccctcgccgccaaggacagccgtttcgatggggtgttttttaccggcgttaaaaccacc
ggtgtgtattgccgcccggtgtgtggcgtcaagacgccgcgtgaatcgtcctgcgagttt
ttcagcagcgcagcagcggcagaggctgccggttttcgcccatgcctgcgttgccgccct
gagctggcaccgtatgcgatacagcaaaatcttgcccatgcgatctggcaaagaatcgct
gatggtgccctgaatgaaaccgatatagaaagcttctctgaacaggttggcctgtcttca
cgccagttgcgccgcgtcatgctgcaagagtttggcgtgacaccggtagaactggcccag
acccagcgcctgttgtttgccaaaaaactgttgcaagagactcagctaggcatggcagag
atcgcctttgctgccggttttggcagtgtcaggcgcttcaatgccctgttttcagaacgt
taccagatggccccgggatcaatacggcgtgctgccgacagcgcaggcgaaggcgtttgc
ctgaagctggcttaccgcccaccctatgcctgggacgcagtgatcacttaccttgccggg
cgcgccatgccagggctggaagccgtcattgatgaaaaaggcggcaaggcctatgtacgc
agcgtacagatggaagggctggaaggctggctcaaagtcgcccatctgcccgccaagcag
caactcagcctgcaagtctcaccttcactggccccggtactcatgccgctgatggccagg
gtcaggcagcagtttgacctggaagccaatcccgccgtcatccagagccatctgcaaaca
gatagcctgctggccgggcaaatcctgcgcacgcccggcatgcgtgtgcccggtgccttc
aatagttttgagctggccattcgtgccgtgctgggccagcaagtcagcgtggccggtgct
accacggtagcgggcaggctggtgaaccgctttggtcagccagtgcttaccccgtttgcg
gctgtcacacatcatttccccagcccgcaaacgattgttggcttgtcgatagaccaactg
gccggcataggcatacccggtgcccgcgccgccacgctgcaaaacattgcccggtttgca
cttgatggtggcttgcaaaggcagttggcggccagttcggacgagatggtagccaggctc
aagaccgtcaaaggcataggtgagtggaccgcgcaatatattgccatgcgcgccctgcgt
ttttcagatgcctttccggcaggtgacctgggtttgcaaaaagctgccgcattattggca
actccggcaaccccggcaagcgagcgtctgaccgaaaaacaattactggctgtcgcccag
ccctgggcaccgtggcgggcgtatgcagctttactgctgtggcaatcattaagtcaacaa
taa
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