Ureaplasma parvum serovar 3 ATCC 27815: UPA3_0370
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Entry
UPA3_0370 CDS
T00680
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
upa
Ureaplasma parvum serovar 3 ATCC 27815
Brite
KEGG Orthology (KO) [BR:
upa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
upa03016
]
UPA3_0370 (truB)
Enzymes [BR:
upa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UPA3_0370 (truB)
Transfer RNA biogenesis [BR:
upa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UPA3_0370 (truB)
Prokaryotic type
UPA3_0370 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Glyco_hydro_108
Motif
Other DBs
NCBI-ProteinID:
ACA32964
UniProt:
B1AIZ3
LinkDB
All DBs
Position
402004..402687
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AA seq
227 aa
AA seq
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MSAISKNIIIINKPIKWTSNDVVQKVKRVIGAKKVGHAGTLDPNASGVLVLGINEGTKLL
TKLILDNKSYIAEIKFGTSTNTYDAAGEIVSSTNRMVTLTEVTKIVKDFYKNDYWQKPPQ
FSALKINGQKAYVLARQKVDFEIAPRLVKIFKYQIMDFNYEKQILKISLHVSKGFYVRSF
AVDLATKINNLAHLLTLIRTQSGPFEIKDAIEIEQVYDYWNNINKYL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctattagtaaaaatattattatcattaacaaaccaataaaatgaacttctaat
gatgttgttcaaaaggttaaacgggttattggtgctaaaaaagttggacatgctggaact
ttagatcctaatgcttcaggtgttttagtattgggaattaatgaaggaacaaaactatta
acaaaattaatactagataataaatcatatattgctgaaattaaatttggaacatcaaca
aatacttatgatgcagcaggtgaaattgtttcatctacaaaccgaatggttacattaact
gaggttactaaaatagttaaagatttttataaaaatgattattgacaaaaacccccacaa
tttagcgctttaaaaatcaacgggcaaaaagcttatgttttagcacgtcaaaaagttgat
tttgaaatagcaccacgattagttaaaatatttaaatatcaaattatggatttcaattat
gaaaaacaaattttaaaaatttctttacatgtttctaaaggtttttatgttcgttctttt
gctgttgatttagctactaaaattaataatctagctcatttattgacattaataaggacg
caaagtggaccttttgagattaaagatgcaattgaaattgaacaagtctatgattattga
aataacatcaacaaatatttataa
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