Ureaplasma parvum serovar 3 ATCC 27815: UPA3_0621
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Entry
UPA3_0621 CDS
T00680
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
upa
Ureaplasma parvum serovar 3 ATCC 27815
Brite
KEGG Orthology (KO) [BR:
upa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
upa03019
]
UPA3_0621
03009 Ribosome biogenesis [BR:
upa03009
]
UPA3_0621
Enzymes [BR:
upa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UPA3_0621
Messenger RNA biogenesis [BR:
upa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UPA3_0621
Ribosome biogenesis [BR:
upa03009
]
Prokaryotic type
rRNA helicases
UPA3_0621
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
PhoH
AAA_22
Arc_C-lobe
CACHD1_mid
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACA32869
UniProt:
A0A2C9DYD0
LinkDB
All DBs
Position
complement(727803..729134)
Genome browser
AA seq
443 aa
AA seq
DB search
MKFNSNYQKWILDSLINQKIFEPTPIQLKTMPLIAKRENIIGVAPTGTGKTLAFVLPILN
NLDLSQKLQVIIITPTRELARQIFSKIIVFKKHQPLLQVKMLIGGESIDQQINSQLNKSQ
LLIATPTRLKQILTRQILDLHHVNALVFDEADMLMDLGFISDLEFINSQFTNKDVQKISF
SATLHEMLSIQLKKYFKNTKIINISNSIYENKKITHYVIHNHDKWHSLSIIMKTIKPYLC
IIFANTKKEVEAIYQYLIQQNKNVCILHGSLLQRERKNNYRDIKNNKFQYVVASDIASRG
LDIDGVSHIINWNLPTENEWYIHRAGRSGRGKYSGESYVLYDQKEHDKLLNLSKKGIVFH
HKFIKENELFDKEFLFKKKNQFKDLKTQNEIQKIISTTSTKIKPGYKKKIKEAIQKINQK
NKRSHIEKKMNAHRIRGYKLKNS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatagtaattatcaaaaatgaattcttgattcattaattaaccaaaaaatt
ttcgaaccaacacctattcaattaaaaacgatgccattaatcgctaaaagagaaaatatt
attggcgttgcaccaacagggacagggaaaactttagcctttgttttgcctatattaaac
aacttagatttatctcaaaaactgcaagttataattattactcccactcgtgagttagct
cgccaaatttttagtaaaattattgtttttaaaaaacatcaaccacttttacaagttaaa
atgttaattggtggtgaaagtattgaccagcaaattaattcacaattaaataaaagccaa
ctgcttattgcaactccaacgcgtctaaaacaaattttaacacgacaaattcttgattta
caccatgttaatgcacttgtttttgatgaagctgatatgttaatggatcttggttttatt
agtgatttagagtttattaactcacaatttacaaataaagatgtacagaaaataagtttt
agcgctacactgcacgaaatgttatcgatccaattaaaaaaatattttaaaaatacaaag
attattaatattagtaattcaatttatgaaaataaaaaaataacccattatgttattcat
aatcacgacaaatgacattcattatctataattatgaagactattaaaccttatttatgt
atcatttttgcaaatacaaaaaaagaagttgaagcaatttatcaatatttaattcaacaa
aataaaaatgtttgcattttgcatggctcactacttcaacgtgaacgaaaaaacaactat
cgtgatattaaaaataataaatttcagtatgttgttgcctcagatattgcaagtcgtggt
ttagatattgatggtgtaagtcatattattaattgaaatttgcctactgaaaatgaatga
tacattcaccgtgcaggacgtagtggtcgtggtaaatatagtggagaatcatatgtttta
tatgatcaaaaagaacatgataagttattgaatttatcaaaaaaaggaatcgtctttcac
cataaattcattaaagaaaatgagttatttgataaagaatttctttttaagaaaaaaaat
caatttaaagatttaaaaacacaaaatgaaattcaaaaaataatctcaacaacaagtaca
aaaataaaaccaggatataaaaagaaaattaaagaagctattcaaaaaattaatcaaaaa
aacaaacgctctcatatcgaaaagaaaatgaatgctcaccgaattcgtggatataaatta
aaaaatagttaa
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