Undibacterium piscinae: EJG51_000685
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Entry
EJG51_000685 CDS
T06644
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
upi
Undibacterium piscinae
Pathway
upi03030
DNA replication
upi03430
Mismatch repair
upi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
upi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJG51_000685 (holB)
03430 Mismatch repair
EJG51_000685 (holB)
03440 Homologous recombination
EJG51_000685 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
upi03032
]
EJG51_000685 (holB)
03400 DNA repair and recombination proteins [BR:
upi03400
]
EJG51_000685 (holB)
Enzymes [BR:
upi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJG51_000685 (holB)
DNA replication proteins [BR:
upi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EJG51_000685 (holB)
DNA repair and recombination proteins [BR:
upi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EJG51_000685 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
DNApol3-delta_C
RNA_helicase
YAcAr
ATPase
AAA_22
TsaE
AAA_14
Mg_chelatase
Zeta_toxin
nSTAND3
AAA_5
NACHT
TniB
Sigma54_activat
AAA_7
GvpD_P-loop
AAA_33
ResIII
Torsin
Motif
Other DBs
NCBI-ProteinID:
QJQ04609
UniProt:
A0A6M4A3F3
LinkDB
All DBs
Position
137348..138385
Genome browser
AA seq
345 aa
AA seq
DB search
MSDSLFPWHRSAWTQLQSLRQRMPHAILLHGAEGTGKTLFAEQFAQSLLCETPRPDGHAC
LECASCSWFSQYSHPDYRRVRPELLDEEEGAAGELESAEPDKKTAKASKTPSKEIVINQV
RALADFMNISTHRQGRRVVLLYPAEALNVPAANALLKSLEEPNANTVFILVSNSLDKLLP
TILSRCHKFPLGMPSKAQSMEWLGSQKVTDAEAWLAQQGGAPLSALQMSQSEGRADLDDF
LRQLSKPGVEGSLKLAEKMQKMDVPTTVSWLQRWLYDIFSYKQSGRIRYYPRYQKELALL
ASRTETMALLAVISNTGERQSIASHPLSAKLFIEDMLLDYSALFH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcgctttttccctggcatcgttcggcttggacgcagttacagtcactgcgt
cagcgcatgccccatgctattttgttgcatggagcggaaggcacaggaaagaccttgttt
gccgagcagtttgcgcaatccctgctgtgtgagacgcccaggccggatggtcatgcctgt
cttgaatgtgcttcgtgctcttggtttagccagtatagtcaccccgactaccggcgtgtc
aggcccgaattgctggacgaggaagagggcgctgccggtgagctggaatctgccgagccg
gataagaaaacggccaaggcgagtaaaactccttccaaggaaatagtcatcaaccaagtg
cgtgccttggcagatttcatgaatatatccactcaccggcaaggccgccgggtggtttta
ctttatcctgctgaagccttgaatgtcccggctgccaatgcgctgctcaagtcgcttgaa
gaacccaatgccaataccgtatttattttggtatcaaatagtttggataagctgttaccg
actattttgtcgcgctgccataaattcccactgggaatgccgtcgaaggcgcaatccatg
gagtggttgggatctcagaaagtgactgacgctgaggcgtggttggcacagcaaggcggc
gcaccactgtctgccttgcagatgtctcaatctgaggggcgggccgatttggatgatttt
ttgcgtcaactgagtaagcctggtgtggaaggcagcttaaaattggcggagaaaatgcaa
aaaatggatgtgccaacaaccgtgtcttggttgcagcgttggctgtacgacattttttct
tataaacaaagtggcagaatccggtattatcctcggtatcaaaaagaattggcattgttg
gcctcccgtactgaaactatggccttgctggctgtcatcagtaatacgggtgagcgacag
tcaatcgcgagccacccgctatcggccaagttatttattgaagatatgttgttggattat
tctgcacttttccattga
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