Undibacterium piscinae: EJG51_002530
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Entry
EJG51_002530 CDS
T06644
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
upi
Undibacterium piscinae
Pathway
upi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
upi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EJG51_002530 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upi03400
]
EJG51_002530 (recB)
Enzymes [BR:
upi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EJG51_002530 (recB)
DNA repair and recombination proteins [BR:
upi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJG51_002530 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QJQ04914
UniProt:
A0A6M4A188
LinkDB
All DBs
Position
complement(537223..541041)
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AA seq
1272 aa
AA seq
DB search
MTSAKHDTIESASQTLDALSFPLHGSRLIEASAGTGKTWTIAALYLRLVLGHGGEAGFVR
ALLPSEILVMTFTRAATRELSNRIRERLLQAAKCFRGEPVDKKDVFLWDLIAAYAPGEQR
QQAAHRLMLAADTMDEAAVFTIDAWCQRMLREHAFDSGSLFDEELVSDESALLEDAVRDY
WRQHVYRLDSKALASLRMCWADVNALEAAIRPLVQRVELLTGEPADSSAAPTQTERNLAT
LIQRIQNEQTAALGQLKQGWDQRAQGMHEWIVAEQTAAPKCFSGVKLKPANVSAWFNSLR
EWANDPQMLMPASFDKAWSRLSPAGITDACNKGYDLVAPSDFALLAELKTALDAIEPLKF
ALMRHAASAIAQRVAYLKQSTRQFGFADMLTRLRVALLGTNGPALRQRIVQQFPLAMIDE
FQDTSPEQYQIFDALYQVASNQRDQGLFLIGDPKQSIYGFRGADIHSYLAARLATTGRHY
LLGTNYRSTVPLVSAVNQIFLHAEGRPSQAKDSPAQAGFSAGAFKFRTSAGNPLPFEPVA
SNGRAETLVNSNGAVAPLSLCCSQEADLNKDDYLSLFAGHCAEHIVGLLNDEQAGFDKNG
EFTRLQPADIAILVRDRHEAAAIRRALQRRKIASVYLSDKDSVIRSEEAADVLRWLRAVS
SPLDSGLGRAAFATASARLSLAALATHAFDDMVWEQRVEQLKGLHQLWQRQGVLAMLRRL
IHDLDLPASLLKEAGGERRLTNLLHLAELLQNASTQLDGEQALIRWLAEQIDNESEGGDE
RILRLESDAELVKVVTVHKSKGLEYPLVYLPFAVSARPASTRNRSFLEFVDENGDKQLDL
SMSDHALDQMEQARIEEDLRLLYVALTRARHALWLGVASLKNKIHDSALGYLIAGGRAVA
ASELGEELGKLKGACDDILISAIPSIEEPIDVTLLSRQDQRPALIDAPLFSASFERDWSV
GSFTSLTKAMQTGAMESKQASVVTRGPQQEKLLEDPDQLIAGALDKQDQSQVNNPDTVWH
SFPRGPLPGQFLHEQLEWMGLEGFAGANHENFSSRLAVRCERAGWAHRQDDASVWLQAIA
NTTLPAIAASLCELQPTSTLPEMEFWFPSEHLATAELDRLCQRHLLSELTKLSGINGIGA
TARPALPERQLHGMLKGYADLVFEHEGRYWVLDYKSNWLGTDDASYHADALATAMAAHRY
DVQGAIYLLALHRLLKSRLGEHYDPETQLGGALFFFLRGIRHETTQGCYQLSACGEFLDA
LDQLFTPETVNP
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgccaagcatgacaccatagagagcgctagccagacgctggatgccttaagt
tttccactacatggatcacgcctgatcgaggccagcgccggtaccggcaaaacctggact
atcgccgccctgtatctgcgcctggtgctcggacacggcggcgaagctggctttgtgcgg
gctttactgccatcggaaattctggtgatgaccttcacccgcgccgccacgcgtgaattg
tctaaccgcatccgcgaacgcctgctgcaggcggccaaatgctttcgcggtgaaccggtc
gataaaaaagatgtgttcttatgggatctgatcgctgcctatgcgcccggggagcaacgc
cagcaagccgcacaccgcctgatgctggccgccgacaccatggacgaagcggcggtattc
acgatcgacgcctggtgccagcgcatgttgcgcgaacatgcgtttgacagcggcagcctg
tttgacgaagaactggtcagcgatgaatcggccttactggaagatgcggtacgcgactat
tggcgccagcatgtttaccggctagacagcaaggcactggccagcctgcgcatgtgctgg
gccgacgtcaacgcactcgaagcggcgatacgcccgctggtgcaaagggtggaattattg
actggtgaacctgccgatagctcagcggcaccaacgcaaaccgagcgcaatttggccacg
ctgattcagcgtatccaaaacgagcaaactgccgcgctgggccaactcaagcaaggctgg
gatcagcgcgcccagggcatgcacgagtggatagtggccgagcaaaccgccgcacccaaa
tgctttagcggggtcaagctgaaaccggccaatgtcagcgcctggtttaactccttacgc
gaatgggccaacgatccgcaaatgctgatgcccgcctcattcgacaaagcctggagccgg
ctcagcccggcaggcataacggatgcctgcaacaagggttacgatctggtggcaccatcc
gatttcgccttgctggcggaattaaaaaccgcacttgatgcgatagaaccactcaagttt
gcgctgatgcgccacgccgccagcgccattgcgcaacgcgtcgcctatctgaaacagagc
acgcgccagtttggctttgccgacatgctaacgcgcttgcgggtcgccttgctaggcact
aacggaccagccttgcgacaacgtatcgtgcagcaatttccactggcgatgatcgatgaa
tttcaggacacctcgcccgagcaataccagatttttgatgcgctgtatcaggtggcgagc
aatcagcgcgatcagggcttatttttgatcggcgatcccaagcagtcgatttacgggttt
cgcggtgccgacatacacagctatctggcggcaagactggccactaccgggcgccattat
ctgctgggcaccaactaccgctcgaccgtgccgctggtcagtgccgtcaaccagatattc
ctgcatgccgaaggccgcccttcacaagcaaaagatagtccggcacaagccggttttagc
gccggagcatttaagtttcgcactagcgccggcaacccgctgccgttcgagccggttgcc
agtaatggccgcgccgaaacgctggtcaacagcaatggtgcagtggcgccgctgagcttg
tgttgtagtcaagaagcggatctgaataaggatgattacttaagcctgtttgccggccac
tgcgccgaacatatcgttggcttactcaatgacgagcaggccggttttgacaagaacggc
gagttcacccgcctgcagccggccgacatcgccatcctggtacgtgatcgccatgaagcg
gcggcgatacgccgggcgctgcaaaggcgcaagatcgccagcgtctatctatccgacaaa
gattcggtgatacgcagcgaggaagcggccgacgtcttacgctggctgcgtgcggtgtcg
agtccgctagacagcggcctgggacgtgccgcttttgccaccgctagcgccagattaagc
ctggcggcactggccacccatgcctttgatgacatggtgtgggagcagcgagtagagcaa
ctcaaaggtctgcatcagttatggcaacgccagggcgtcttggcgatgctgcggcgcttg
attcacgatctggacttgcccgcgagcttactcaaggaagccggtggcgaacgccgcctg
accaatctgctgcacctggccgaattattgcaaaacgccagtacacaactcgatggcgaa
caagccctgatacgctggctggccgaacagatagacaacgaaagcgaaggcggcgacgag
cgtatcctgcgactggaaagtgatgccgaactggtcaaggtggtgaccgtgcataaatcc
aagggactggaatacccgctcgtgtatttgccgtttgcggtcagcgcccgtcccgccagc
acgcgtaaccgcagctttctcgaatttgtcgatgaaaatggcgacaaacagctagacctg
agcatgtcagaccatgcgctagaccaaatggaacaagccaggatagaggaagacctgcgg
ctgctatatgtggcgctaacccgcgcccgccatgccttgtggctgggcgtggcatcgctg
aaaaacaagatccatgacagcgccctcggctatctgattgccggtggccgggcggtcgcc
gccagcgaactgggcgaggaactgggtaagctcaaaggcgcttgcgacgacatcctgatc
agcgcgatcccgtcgatagaagaacctatcgacgtcaccctattgtcacggcaagaccag
cggcccgccttaatcgacgccccgctgtttagcgccagcttcgaacgcgactggagcgta
ggcagttttacctcgctaaccaaggccatgcaaacgggcgcgatggaaagcaaacaggct
agcgtagtgacgcgcggcccgcaacaggaaaaactgctggaagatccggaccaactgata
gccggcgcgcttgataagcaagaccaatctcaagttaacaacccggatacggtctggcat
agttttccgcgtggcccgctgcccggccaatttttgcacgagcaacttgaatggatgggg
ctggaaggttttgccggtgccaatcacgagaatttcagcagccgcctggcagtacgctgc
gaacgcgccggctgggcgcaccgtcaggacgacgccagtgtctggttgcaggccatcgcc
aacacgacattgccagctatcgcggccagcctgtgcgaactgcagccaaccagtacgctg
ccggaaatggaattctggtttcccagcgagcatttggctactgccgagctggaccgttta
tgccagcgccatttgctcagtgagctcactaagctaagcgggatcaacggaataggcgca
acagcgcgccccgcgctgcccgagcgccagttgcatggcatgctcaaggggtatgccgat
ctagtgtttgaacatgagggccgttattgggtgctcgattacaaatccaactggctaggt
accgatgatgccagctatcacgccgacgccctcgcgacggcgatggcggcgcaccgttac
gatgtgcaaggcgcgatttacctattagccttgcatcgcttgctgaaaagccgcctcggc
gagcactacgacccggagacccaactgggcggtgccctgttctttttcttgcgcggcata
cgtcatgaaactacacagggttgctatcagttaagcgcctgcggtgaatttctcgacgca
ttagatcaattatttacccctgaaacagtgaacccatga
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