Undibacterium piscinae: EJG51_005770
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Entry
EJG51_005770 CDS
T06644
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
upi
Undibacterium piscinae
Pathway
upi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
upi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJG51_005770 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
upi03019
]
EJG51_005770 (pnp)
03016 Transfer RNA biogenesis [BR:
upi03016
]
EJG51_005770 (pnp)
Enzymes [BR:
upi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EJG51_005770 (pnp)
Messenger RNA biogenesis [BR:
upi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EJG51_005770 (pnp)
Transfer RNA biogenesis [BR:
upi03016
]
Prokaryotic type
tRNA degradation factors
EJG51_005770 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
S1_2
KH_KhpA-B
KH-I_KHDC4-BBP
DUF5813
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QJQ05437
UniProt:
A0A6M4A4E4
LinkDB
All DBs
Position
complement(1254448..1256586)
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AA seq
712 aa
AA seq
DB search
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVAKKDAKPGQDFFPLT
VDYMEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV
NPEIDPDIAAMIGASAAICVSGIPFNGPIGAARVGYIDGAYVLNPTASQLKLSEMDLVVA
GTEQAVMMVESEAKVLSEEIMLGAVVYGHEQMKAVIDAIHDLVADGGKPEVQWAPAAKNE
TLIAQVTAVAEPLLRAAYQIKEKQARTEQLKSATAAISAALAEQSAAAGVDAPNSADVSN
VMFDLEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGTALFTRGETQALVIAT
LGTARDEQKIDALMGEFTDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALLAAM
PAAEDFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKF
AVLTDILGDEDHLGDMDFKVAGTAEGITALQMDIKIQGITKEIMKVALAQAKEGRVHILG
EMQKAVPHGKAELSDFAPRLITVKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDAAAGQEAKRRIQELTAEVEVGKVYEGTVLKLLDFGAIVQIMPGKDGLLHISQIA
NERVNAVADYLKEGQQVKVKVLETDDRGRFKLSMKAAAAEAETQPQAQEAQQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaataaagttacgaaaaccttccagtacggtcaacatcaagttaccctggaaact
ggcgaaatcgctcgccaagcgtccggtgcagtattggtctcgattgaagataccgttgtt
ttggctactgttgtcgccaaaaaagatgcaaaaccaggtcaggattttttcccgctgaca
gttgattacatggaaaaaacctatgcggcgggccgtattccgggtggtttcttcaagcgt
gaaggccgtccgtctgaaaaggaaacgctgacatcgcgtttgatcgatcgtcctatccgt
cctttgttccctgaaggttacctcaatgaagttcaggtaattattcatgtgttgtcggtt
aatcctgagattgatccggatatcgctgccatgataggcgcatccgctgcaatctgcgtt
tccggcattccgtttaatggtccgattggcgccgcgcgcgttggttatatcgatggcgct
tatgtcttgaatccaactgcaagccagttgaaattatcggagatggatctggttgtcgct
ggtactgagcaagcggtcatgatggttgaatctgaagccaaagtgctgtccgaggaaatc
atgctgggcgcggttgtttacggccatgagcaaatgaaggcagtgattgatgcgattcat
gatctggttgctgatggtggtaagccagaagttcaatgggctccggctgctaagaatgaa
actttgatcgcacaggtaactgcagtggctgagccattgttgcgcgctgcgtatcagatt
aaagaaaagcaagcccgcactgagcaattgaaatccgctactgccgcgatctccgctgca
ttggctgagcaatctgccgctgccggtgttgatgcgccaaattcagctgacgttagtaac
gttatgtttgacctagaggcgaagattgttcgctcgcagattcttgagggtgagccacgt
atcgacggtcgtgatacacgcactgtgcgtcctatctctatccgtacaggcgtgttgcca
cgcactcacggtaccgcattgtttacccgtggtgaaactcaggctttggtcattgccact
ctgggtactgcgcgtgacgagcaaaaaattgacgccttgatgggtgaatttactgaccgc
ttcatgctgcattacaatatgcctccgttcgctactggtgaaaccggtcgtgttggtacg
cctaagcgtcgtgaaattggtcacggccgtttggctaagcgtgctttgctcgcggctatg
cctgcagcggaagactttagttattccgtacgcctggtgtcggaaattactgagtctaac
ggttcctcttcgatggcatcggtttgcggtggttgcctggctctgatggatgctggtgtg
cctatgaaagcgcacgtcgctggtatcgccatgggtctgatcaaagaaggtaataaattt
gccgtcttgacggatatcttgggtgatgaagatcatctgggtgatatggactttaaagta
gccggtaccgcagaaggtattactgctctgcaaatggatatcaaaatccagggtattacc
aaggaaatcatgaaggtcgctttggcgcaagctaaagaaggccgcgtgcatattctgggt
gaaatgcagaaagcggttcctcatggtaaggctgagttgtccgatttcgctcctcgcctg
atcactgtgaagatcaatcctgaaaaaatccgtgacgttatcggtaagggcggtgcggta
attcgtgccctgacggaagaaactggtacgcaaatcgacattagcgacgagggtgttgtt
accatcgcttcagttgatgctgccgctggtcaggaagccaagcgtcgcattcaggaattg
acagctgaagttgaagtcggcaaggtctatgaaggcactgtcctgaaattgttggatttc
ggggctatcgtacaaatcatgccgggtaaagatggtttgttgcacatcagccagattgcc
aatgagcgtgtcaatgccgttgctgactaccttaaagaaggtcagcaagtgaaagtgaaa
gttctggaaacagatgatcgcggtcgctttaagttgtcgatgaaagctgcagccgctgaa
gcggaaactcagccgcaagcacaagaagcccagcagtaa
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