Neoundibacterium piscinae: EJG51_009325
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Entry
EJG51_009325 CDS
T06644
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
upi
Neoundibacterium piscinae
Pathway
upi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
upi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EJG51_009325 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
upi03021
]
EJG51_009325 (rpoA)
03400 DNA repair and recombination proteins [BR:
upi03400
]
EJG51_009325 (rpoA)
Enzymes [BR:
upi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EJG51_009325 (rpoA)
Transcription machinery [BR:
upi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EJG51_009325 (rpoA)
DNA repair and recombination proteins [BR:
upi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EJG51_009325 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF7219
Motif
Other DBs
NCBI-ProteinID:
QJQ06020
UniProt:
A0A6M4A5N6
LinkDB
All DBs
Position
complement(2106038..2107015)
Genome browser
AA seq
325 aa
AA seq
DB search
MQNNLFKPRIIDVEMLGAGHAKVVMEPFERGFGHTLGNSLRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVDILLNLKGIVFKVHNRDEVTLTLKKDGEGPVLASDIDLPHDVEL
INPDHVIANLTVGGKLDMQIKVEKGRGYVPGNVRRLSEDANKTIGRIILDASFSPIRRVS
YSVESARVEQRTDLDKLIINIETNGVISPEEAIRQSARVLVDQLNVFAALEGTEAAAEAP
SRAPAVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLSLGMKLENWPPVGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaatttgtttaagccacgtattattgatgtggaaatgctgggtgccggtcac
gctaaagtcgtgatggaaccgtttgaacgtggtttcggacacacactgggaaattccctg
cgccgtgttctgttgtcttccatggtcggatacgctcctactgaggtaacaattgctggc
gttgttcatgagtactctactcttgatggcgttcaggaagacgttgttgacattttgctc
aatctgaagggtatcgtcttcaaggtgcataaccgtgatgaagttactttgacattgaaa
aaagatggcgaaggcccggttttggcttcggatatcgatttgccacatgacgttgagctg
attaatccagatcacgttattgcgaatctgacagtcggcggtaagctggacatgcagatc
aaggtcgaaaaaggccgtggttatgtaccaggtaacgttcgtcgcttgtctgaagatgcg
aacaaaactatcggtcgtattattttggatgcatcgttttctccaattcgtcgcgtatcc
tactccgtagaatccgctcgtgttgaacagcgtacggatctggataagttgatcatcaat
atcgaaacaaacggtgtgatttctcctgaagaagccattcgtcagtccgctcgtgttttg
gtagatcagttgaacgtgtttgccgctttggaaggtactgaagctgccgctgaagcgcca
tcccgcgcaccagcagttgatcctgtcttgttgcgtccagtggatgatctggaattgaca
gttcgttcagcaaactgcctgaaagcagaaaatatttactatattggtgacttgatccaa
cgtagtgaaaatgagctgttgaagacaccaaacttgggtcgcaaatccttgaatgaaatc
aaggaagttttggcgtcccgtggcttgtctttgggtatgaagctggaaaactggccgcca
gttggcctggaaaaataa
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