Undibacterium piscinae: EJG51_011940
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Entry
EJG51_011940 CDS
T06644
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
upi
Undibacterium piscinae
Pathway
upi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
upi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EJG51_011940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upi03400
]
EJG51_011940
Enzymes [BR:
upi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJG51_011940
DNA repair and recombination proteins [BR:
upi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJG51_011940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
HypA
AAA_30
Zn_ribbon_6
ADDB_N
SWI2_SNF2
zf-CHY
AAA_19
PhoH
Motif
Other DBs
NCBI-ProteinID:
QJQ06441
UniProt:
A0A6M4A588
LinkDB
All DBs
Position
complement(2650035..2652980)
Genome browser
AA seq
981 aa
AA seq
DB search
MEHCILQVALDTPLDRLFDYRWPLPAPGPVTGDTVEACAAPMPQLGQLVLLPFGRQQMMG
LIVGISDHTDVPEAKLKDGLELRSQLPPLSAQWIALCRFAADYYQRPLGEVALPALPRNL
RAGKATSLDRNLKKLAKLSPALDANPNPEPPLNAAQQEAVDAISGTASGNAGFAAHLLYG
VTGSGKTEVYLQAAARILAQSEQAQVLILVPEINLTPQLETNIRKRFSGIQIATLHSGMA
EGERLQHWLAAHLGQARIILGTRLAILASLPYLKMIVIDEEHDPSYKQQEGLRYSARDLA
VWRAHQLGIPVVLGSATPSLESWQHAKVGRYRKLELRERAVKDAVLPVVKIINLEHEKPA
EGLTARLIASIRLRLEKGEQSLLFLNRRGYAPVIACDACGWISDCTRCTAHLVMHKLDRK
LRCHHCGYEQRIPHHCPTCGNIDLQPLGRGTQRMEEGLKLIFPEARVFRIDADSTRFKGS
AEAAFDTVHRGEVDILIGTQMVAKGHDFKNLTLVGALNPDSALFSQDYRASERLFAQLMQ
VAGRAGRAAQKQGGNISEVLIQTRYPDHPLYHALMAHDYDRFANDLLEERQQASMPPFIY
QALLRAEAKDLQTALDFLHLAVNCIAHAGITIHDPIPMTMTRVANVERAQLLVESVSRPA
LQAFLKVWIATLRGLKSRVKWGVEIDPVDISSHPSNSFSPRPYRLLMVALASSFMLSSCG
GGADDLIKRLGEVTSCGGKDCKDSSSLRPDEIRANYLISQNAGSVKVEASFSLSTNSATL
VSLNGKDKLSASIGSQSSSLNDIDGSGTKYVANLADASPQASVSVSFNRGSEAFVSSVSM
PKQFAIVSPSEQIALGRSAGSLYVQLDVASDAAISASTKMLCQRADTSVFEATTALKSVY
EPSAAGGAVYRIDTLELDQALNDASRALNSANPNLSLVRSCDLELIWTLSQSGQSASALS
KNSSISAQRSASHLLQYDARK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
gtggaacattgcatactccaagtcgcacttgacacgccactagatcgactttttgactat
cgttggccgcttccggcccctggccctgttacgggtgatacggttgaggcttgcgctgcg
cccatgccgcagctaggtcagttagtgttgctgccgtttggccgccagcagatgatgggc
ttgattgtcggtatcagcgatcatacggatgttcccgaggctaagttgaaagatgggctg
gaactacgcagtcaattgccgcccttaagcgcacagtggatcgcgctgtgccggtttgcc
gccgattactatcagcgtccgctgggcgaggtcgccttgcctgccttaccgcgtaatctg
cgtgcgggcaaagccacttcgctcgaccgcaacctgaagaaactggcgaaactcagtccg
gccttggatgccaacccgaatcccgaaccgccgttaaatgcggcccagcaagaagcggtc
gacgctatcagtggtaccgctagtggcaacgctggcttcgctgcgcatttgctgtatggc
gttaccggcagcggcaagaccgaagtctacctgcaggcggcggcgcggatcctggcgcaa
tctgaacaggctcaggtgctgatactggtgccggaaattaatctgacgccgcagcttgaa
acgaatatccgcaagcgcttttccggcatacagatcgccaccttgcacagcggcatggcg
gaaggcgaacgtttgcagcactggttggcagcgcatctggggcaggctcgcatcatcctc
ggcacgcgtctggcgatcctggcgtcgctgccctacctgaaaatgattgtgatcgacgag
gagcacgatccttcttacaagcaacaggaaggcctgcgttattcggcgcgtgaccttgcc
gtatggcgcgcccatcaactgggcataccggtggtgctaggttcggccacgccttcgctg
gagagttggcagcatgccaaagtagggcgctaccgcaagctggaattgcgcgagcgcgcc
gtcaaggatgcggtcttgccggtggtgaagatcatcaacctggagcatgaaaaacccgca
gaaggtctgaccgccagactcattgcgtcgatacgcttgcgtctggagaagggtgagcag
tcactcttattcttgaaccggcgcggctacgcgcccgtgatcgcctgcgatgcctgtggc
tggatcagcgattgcacgcgttgcaccgcccatctggtaatgcataaactggatcgcaag
ttgcgctgccatcactgcggatacgagcagcgcatcccgcatcattgccctacctgcggc
aatattgatctgcaacccttggggcgcggcacccagaggatggaagaagggctgaaatta
attttccctgaagccagggtgtttcggattgatgccgactcgacccgcttcaaggggagt
gccgaggcggctttcgacaccgtacaccgcggtgaagtggatatcctgatcggcacccag
atggttgccaaagggcacgactttaaaaacctgaccctggttggcgcgctcaatcccgat
agcgccctgttttcgcaagactatagagccagtgaacgtttgtttgcgcaattgatgcag
gtggccggtcgcgccgggcgtgccgcccagaaacaaggcggcaacatcagcgaagtgctg
atccagacccgttaccctgaccatccgctgtaccacgcgctgatggcgcacgactacgac
cgctttgccaatgacttgctggaagagcgtcagcaagccagcatgccaccgttcatttat
caggccttgttacgcgccgaagccaaagacttgcaaaccgcgctagattttctgcatctg
gcggtcaactgcattgcccatgccggcatcaccatccatgatccgataccgatgaccatg
acacgcgtcgccaatgttgagcgtgcgcaattgttggtagagtcagtctcacgcccagcc
ttgcaggcatttttgaaagtatggatagccacgctgcggggcttgaagagccgggtgaag
tggggcgtggagatcgaccctgtggatatctcatcacacccaagcaacagtttttctccg
cggccatatcgcttactgatggtggctttggccagcagcttcatgctgagcagttgcggt
ggtggcgccgacgatctcatcaagcgcttgggcgaagtgactagctgtggcggcaaagac
tgcaaggattccagctccttgcgtcccgatgaaattcgggccaactatctgattagccaa
aacgctggtagcgtcaaagtagaagctagtttcagcctcagcacaaattcggcaacgctg
gtttccctcaatggcaaggacaagctgagcgccagcatcggcagtcagagcagcagcttg
aacgatatcgatggcagtggcaccaaatatgtggcaaatctagctgatgccagcccacaa
gcgagtgttagcgtgagttttaatcgtggcagcgaggcctttgtcagtagcgtgagcatg
cccaagcaatttgccatcgtctcaccgagcgagcagattgcgctcgggcgttcggctggc
agcttgtatgtgcaactcgatgtagcgagtgatgccgcgatctcggccagtactaagatg
ctctgtcagcgtgctgacactagcgtgtttgaagccacaacggcgcttaaatccgtgtat
gagcccagcgctgctggcggtgccgtctatcgtatcgacaccctggagttggatcaagct
ctgaacgacgccagcagggcgctcaattcagccaacccgaatttatccctagtgcgtagt
tgtgatctggagctgatctggaccctgagtcaaagcggccagagcgccagcgcgctgtcc
aagaacagcagcatcagcgcacaacgtagcgccagccatctgctgcagtacgatgccaga
aaataa
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