Undibacterium piscinae: EJG51_016410
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Entry
EJG51_016410 CDS
T06644
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
upi
Undibacterium piscinae
Brite
KEGG Orthology (KO) [BR:
upi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
upi03032
]
EJG51_016410
03036 Chromosome and associated proteins [BR:
upi03036
]
EJG51_016410
03400 DNA repair and recombination proteins [BR:
upi03400
]
EJG51_016410
DNA replication proteins [BR:
upi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EJG51_016410
Chromosome and associated proteins [BR:
upi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EJG51_016410
DNA repair and recombination proteins [BR:
upi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EJG51_016410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QJQ07143
UniProt:
A0A6M4A7I9
LinkDB
All DBs
Position
3645354..3645659
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIARLAERYPQLIAKDVDVAVKAILDAMTDALSTAQRIEIRGFGSFSLNSRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKELRERVDAMVGQPILDD
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagctaattgctcggctggcagagcgatatccacaactgatcgcaaaa
gatgtggatgtcgcggtcaaggccattctcgatgcgatgacggatgctttgtctaccgct
caacgtatcgagattcgtggttttggcagtttttctctgaatagtcggccaccacgtatt
ggacgtaacccgaaatccggtgataaggtaatggttcctgaaaagcgggtgccgcacttt
aaaccaggcaaggaattgcgcgaaagagtcgatgcaatggtagggcagcctatccttgat
gattga
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