Undibacterium piscinae: EJG51_017395
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Entry
EJG51_017395 CDS
T06644
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
upi
Undibacterium piscinae
Pathway
upi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
upi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJG51_017395 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
upi03019
]
EJG51_017395 (pcnB)
Enzymes [BR:
upi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EJG51_017395 (pcnB)
Messenger RNA biogenesis [BR:
upi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EJG51_017395 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
DUF2204
MCR_beta
Motif
Other DBs
NCBI-ProteinID:
QJQ07297
UniProt:
A0A6M4A9Y6
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All DBs
Position
3859293..3860663
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AA seq
456 aa
AA seq
DB search
MIKKFIRKILGVKSKPDEAGGKKNKPTVLSAKEHGINPQLLSSNAIRVTSTLQENGYKAF
VVGGAVRDLLLGVKPKDFDIATNATPEQVKRLFRRAFIIGRRFQIVHVMFGQDLLEVTTF
RGPATEAAPKDEHGRVLRDNTFGEQHEDAVRRDFTINAMYYDPASQTVLDYHGGIADIRK
KTLRIIGVPEARYREDPVRMLRVVRFAAKLQFNIDAATSAPIAVMAPLIDNVPSARVFDE
MLKLLMSGHAMACLQQLRKEGLHHGLMPLLDVVLEQPLGEKFVTLALASTDERIQQGKTV
SPGFLFASLLWHQVLEKWNAYIAAGELSIPALHLAADDVLNTQTDALALQRKIGSDMRDI
WAMQPRFEKRVGKTPYKLLENTRLRAGYDFLLLRCASGEIDAEIGEWWTAFIHGDEAERE
QLLTVKPKSAAGAPAKKRKPRRSASAKPRAPASTGE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaaattcatccgcaaaatacttggcgtaaaaagtaagcctgacgaggccggc
ggcaaaaaaaataagcctacggtattgagtgccaaagagcacggcattaatccgcaatta
ctgtcttccaatgcgatacgggtgacttccaccctgcaggaaaacggctataaggcgttt
gtggtcggcggcgcggtgcgcgatctgttgctgggcgttaaacccaaggattttgatatc
gccaccaatgcgactccggagcaagtcaagcgcctgttccggcgcgccttcattatcggt
cgccgttttcagatcgtgcatgtgatgtttggccaggatttgctggaggtgactaccttc
cgcggaccggctaccgaagcggcccccaaagatgagcatggccgtgtgctgcgcgataat
acctttggcgaacagcatgaagatgcggtccgccgcgatttcaccatcaacgccatgtat
tacgatccggccagccagactgtgctcgattatcacggcgggatcgccgatatccgcaaa
aagaccttgcgcatcatcggtgtgccggaagcgcgttaccgcgaagatccggtgcgtatg
ctgcgtgtggtgcgctttgccgccaagctgcaatttaacatagacgccgctaccagcgca
ccgatcgccgtgatggcaccgttgatcgacaacgtacctagcgcgcgggtgtttgatgaa
atgctcaagctcttgatgagcggccatgccatggcatgtttgcagcagttacgtaaggaa
ggcttgcatcatggcttgatgccgctgctggacgtggtgctggaacaacctctgggtgaa
aaattcgtcacgctggctctggccagtaccgatgagcggatacagcagggtaaaaccgtt
tcgccgggattcttgtttgcctctttgctgtggcatcaggtgctggaaaagtggaatgcg
tatatcgccgcaggagagttgtcgataccggcgctgcatctggcagccgacgatgtgctc
aatacccagaccgatgcgctggcgctgcaacgcaagataggttccgacatgcgtgacatc
tgggccatgcagccgcgctttgaaaagcgtgtcggtaaaacgccgtataaattactggaa
aacaccaggttgcgtgccggttacgatttcctgttgctgcgttgcgcttccggtgagatt
gatgccgaaatcggcgagtggtggaccgccttcatccatggcgatgaggccgagcgtgag
cagttgctgacggtaaagccgaaatcggccgccggcgcaccggccaagaaacgcaagccg
cgtcgctccgcttcggccaagccgcgtgcacctgcaagtacgggtgaataa
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