Undibacterium piscinae: EJG51_018645
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Entry
EJG51_018645 CDS
T06644
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
upi
Undibacterium piscinae
Pathway
upi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
upi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EJG51_018645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upi03400
]
EJG51_018645
Enzymes [BR:
upi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
EJG51_018645
DNA repair and recombination proteins [BR:
upi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EJG51_018645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
Lipase_GDSL_2
SKA2
Motif
Other DBs
NCBI-ProteinID:
QJQ07490
UniProt:
A0A6M4A9Q6
LinkDB
All DBs
Position
complement(4131887..4133257)
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AA seq
456 aa
AA seq
DB search
MIPQSRLTNPIATGSVITVSALNQAVAQLLERNIPLTWVSGEISNFTRAASGHWYFTLKD
SAAQVKAVMFRGRAQYADFAPREGDKVEVRALVSLYAPRGDYQINVEAIRRAGVGNLYEA
FLQLKARLASEGLFDTANKRTIPAFVRRIGIVTSPQAAALRDILTTLHRRAPHIEVILYP
TPVQGEGSAEKIAQAIATASAREECDVLLVCRGGGSIEDLWSFNAEIVARTIAHCSMPVI
SGVGHETDFTIADFAADMRAPTPTAAAELAASARADWLEQLKQSQSSLQRSMQRLLTNQA
QTLDWSARRLLSPLAAIAGKRLQLQNCSQRLRYASHMPLQQAQTILGQWQARLAARRPDC
ATARLHLEAAQRRLTDATQRQLQQNRRTLDNLQTQLELLNPQRTLERGYAILSDHKGKLI
RSSKDIKANSVIHLRTGIDSAELGISTVQTTLGEAG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgattcctcaatcccgtttgactaacccaattgccaccggctctgtcatcacagtctcc
gcgctcaaccaagcggttgcgcaacttctggagcgcaacatcccgctgacctgggtttcc
ggagagatttccaatttcacccgcgccgcatcgggacattggtatttcaccctgaaagac
agcgcggcgcaggtgaaggcggtgatgtttcgcgggcgtgcccaatatgccgattttgcc
ccgcgcgaaggcgataaggtggaagtgcgcgcgctggtgagcctgtatgcgccgcgcggc
gattatcagatcaacgtggaagcgatacgccgggccggggtcggcaacctgtatgaagct
tttttacaactcaaggcgcggctagccagtgaaggcctgttcgacacagccaacaaacgc
accattcccgccttcgtacgacgcataggaatagtcaccagcccacaggcggcggcctta
cgcgacatactcacgaccttgcaccggcgcgcaccgcatatagaagtgattttgtatccg
actccggtgcaaggtgaaggctcagcggagaaaatcgcgcaagctatcgccaccgcctcg
gcccgcgaagaatgtgatgtactgctggtttgtcgcggcggcggcagcatagaggacctg
tggtcgtttaacgctgaaatcgtggcgcgtacgattgcccattgcagcatgccggtcatc
agcggggtcgggcacgagacggactttacgattgccgactttgccgccgacatgcgcgcc
cctaccccgaccgctgcggccgaactggcggcaagcgcgcgtgccgactggctggagcag
ttaaagcaaagccaaagctctttgcaacgcagcatgcaaagactactgacaaaccaggcg
caaaccctggactggtctgcgcgccgcctgcttagcccgctggccgcgattgccggcaaa
cgcctgcaactgcaaaattgctcacaacgcctgcgctatgccagccatatgccgctacaa
caggcgcagacaatactcgggcaatggcaggcgcgtctggccgccagacgaccagactgc
gcgaccgcccgcctgcatcttgaagctgcccagcgtcggcttaccgatgccacgcagcgc
cagctacaacaaaaccgccgtacgctggacaatttacagacacaactggagttactcaat
ccgcagagaaccctcgagcgtggctatgcgatcctgagcgaccataagggcaaactgata
cgttcgagtaaagatatcaaggccaatagcgtgatacacctgcgtaccggcatcgacagc
gccgaactgggaatcagcaccgtgcaaaccacacttggcgaggctggctaa
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