Usitatibacter palustris: DSM104440_00221
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Entry
DSM104440_00221 CDS
T06995
Symbol
cmpR_1
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
upl
Usitatibacter palustris
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
upl03000
]
DSM104440_00221 (cmpR_1)
Transcription factors [BR:
upl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DSM104440_00221 (cmpR_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QJR13438
UniProt:
A0A6M4H2Y5
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Position
complement(237565..238461)
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AA seq
298 aa
AA seq
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MNLNLKQLRAFSAVARSASFTRAAVRLHLTQPALTVQVRDLESALGVRLFDRNTRQVKLT
AIGRDLLPTLERVLADLDAVAEDTRQLAAGHRGRVRVAALPSICATRLPRAIAQLAKTHP
AIRVELRDTVAQRIIALVAAEEVDFGIGSFEGLGREFELLPYTTDRLAAVFRKGHALDKR
ATLKLEDLAEWPLIFMDTQSSVRAHVERTFSARGIAKPPAFEVTYMATAVGLVRAGLGVS
LLPTSALELELATGLRVHPLRDAALRRNISIVRRAGRTFSPAAQRLLEALRAEARPAR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaacctgaagcaattgcgcgccttctcggccgtcgcccggagcgcgagcttc
acgcgcgccgccgtgcgcctgcatctcacccagcccgcgctcacggtgcaggtgcgcgac
ctggaatccgcgctcggcgtgcggctcttcgaccgcaacacccgccaggtgaagctcacg
gcgatcggccgcgacctcctgccgacgctcgagcgggtcctcgcggatctcgacgccgtc
gcggaggatacgaggcagctcgccgccggccaccgcgggagggtgcgtgtcgcggcactt
ccttcgatctgcgctacgcgcctgccgcgcgcgatcgcccagctcgcgaaaacgcacccc
gccattcgcgtggagctgcgcgacacggtggcgcaacgcatcatcgcgctggtggccgcg
gaggaagttgatttcgggatcggcagcttcgagggcttgggccgcgagttcgagctgttg
ccctacaccacggaccgcctggcggccgtcttcaggaaaggtcacgcgctcgacaagcga
gcgacgctgaagctcgaggacctggcagagtggccgctcatcttcatggatacgcaaagc
agcgtgcgcgcacatgtggaacgcacgttctccgcgcgcgggatcgcgaagccgcccgct
ttcgaggtcacgtacatggcaactgccgtggggctggtgcgcgcggggctgggcgtgagc
ctgcttcccacctctgcgcttgagctggaactggcgaccgggttgcgcgtgcacccactg
cgcgatgccgcgctgcgccggaacatctcgatcgtgaggagggcggggcgaaccttctcg
cccgcggcccagcgactgctcgaagcgctgcgcgccgaagcgcgcccggcgcgctag
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