Usitatibacter palustris: DSM104440_00412
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Entry
DSM104440_00412 CDS
T06995
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
upl
Usitatibacter palustris
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
upl03021
]
DSM104440_00412 (rpoH)
Transcription machinery [BR:
upl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSM104440_00412 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
Phage_terminase
KORA
HTH_11
Fe_dep_repress
HTH_20
Phage_Y01A
Motif
Other DBs
NCBI-ProteinID:
QJR13628
UniProt:
A0A6M4H3G9
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Position
complement(379295..380143)
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AA seq
282 aa
AA seq
DB search
MTSMTLPVVSVSSLESYVQAVNAIPMLTPERELELGRKLKDQNDLTAAGDMVMSHLRLVV
SVARNYMGYGLPQADLVQEGNIGLMKAVKRFDPERGVRLASFAIHWIKAEIHEYILRNWR
LVKVATTKAQRKLFFNLRSMKASSATLSPKEVKQIAKTLNVKESDVVEMESRLQGSDIPL
EPTVDDGEESYAPIAYLKDTGETPAEELERTQSENLRTAGLTAALEGLDERSRRIIRARW
LNETNPMTLTELADEFGVSAERIRQIEAKAMQKMKVQLAEVR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcatgacccttccagtggtttcggtttccagcctggagtcctatgtccaggcc
gtgaacgccattccgatgctgacgcccgagcgcgaacttgaactcggccggaagctcaag
gaccagaacgacctgacggccgccggtgacatggtgatgtcgcacctgcgcctcgtggtc
tcggtcgcgcgcaactacatgggctacggcctgccccaggcggacctcgtgcaggaaggc
aacatcggcctgatgaaggcggtgaagcgcttcgacccggagcgcggcgtgcgccttgcc
tcgttcgcgatccactggatcaaggccgagatccacgaatacatcctgcgcaactggcgg
ttggtgaaggtcgccacgaccaaggcgcagcgcaagctcttcttcaacctgcgaagcatg
aaggcttcgtcggcgacgctttcgcccaaggaagtgaagcagatcgcgaagactctcaac
gtgaaggagagcgacgtcgtcgagatggaaagccgcctgcagggttcggatatcccgctc
gagccgacggtcgatgacggcgaagagtcgtacgcgccgatcgcctacctcaaggacacg
ggcgagacgccggccgaggagctggagcgcacgcagtcggagaaccttcgcactgccggc
ctcaccgccgcgctcgaagggctcgacgaacgcagccgccgcatcatccgcgcgcgctgg
ctcaacgagaccaacccgatgacgctgaccgagctcgccgacgagttcggcgtctccgcc
gagcgcatccgccagatcgaagccaaggcgatgcagaagatgaaggtgcagctcgcggaa
gtccgctag
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