Usitatibacter palustris: DSM104440_00647
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Entry
DSM104440_00647 CDS
T06995
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
upl
Usitatibacter palustris
Pathway
upl00470
D-Amino acid metabolism
upl00550
Peptidoglycan biosynthesis
upl01100
Metabolic pathways
upl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSM104440_00647 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSM104440_00647 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DSM104440_00647 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
upl01011
]
DSM104440_00647 (ddl)
Enzymes [BR:
upl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
DSM104440_00647 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
upl01011
]
Precursor biosynthesis
Amino acid ligase
DSM104440_00647 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
RimK
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QJR13857
UniProt:
A0A6M4H7A2
LinkDB
All DBs
Position
619172..620122
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AA seq
316 aa
AA seq
DB search
MSARDFGKVAVLMGGPSAEREISLISGKAVLGALQEKRVDAHAFDPAERELFDLKREGFK
SVFIALHGRFGEDGTVQGALETLRVPYTGSGVMGSAISMDKWRTKLVWLAAGIPTPKFVM
LKASSDWDRVVAVLGLPLIVKPVHEGSTIGLTKVSRAADLPAAYQLAAKYDALVIAEEFI
AGQELTAAILHDGPTATDRALPLVRIEAPQGNYDYQNKYFTDDTRYYCPSGIRAEVEDEI
REVAVRSFRVLGCRGWGRADVMLRPDGTYSFLEMNTSPGMTGHSLVPMAAKATGLSYADL
CVEILAGASLDSGARQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgcgatttcggcaaggtcgccgtcctcatgggcggaccgtcggcggaacgc
gagatctcgctcatctccggcaaggccgtgctaggggcattgcaggagaaacgcgtggac
gcgcatgccttcgatccggccgagcgcgagctcttcgacctgaagcgcgaaggcttcaag
tccgtcttcatcgcgttgcacggccgcttcggcgaggacggcaccgtgcagggcgcgctc
gagacgctgcgcgtgccctacaccggcagcggcgtgatgggctcggcgatctcgatggac
aagtggcgcacgaaactcgtgtggctcgccgccggcatccccacgccgaagttcgtgatg
ctgaaggcctcgagcgactgggaccgcgtcgtggccgttctcggcctgccgctgatcgtg
aagccggtgcacgaaggttcgacgatcgggctcacgaaggtgagccgcgccgccgacctt
cccgccgcgtaccagctcgccgcgaagtacgacgcgctcgtgatcgccgaggaattcatc
gccggccaggagctcacggccgcgatcctgcacgacggcccgacggccaccgatcgcgcg
ctgccgctcgtgcgcatcgaggcgccgcagggcaactacgattaccagaacaagtacttc
accgacgacacgcgctactactgtccgtcggggatccgcgcggaagtcgaggacgagatc
cgcgaagtcgccgtgcgcagcttccgcgtgctcgggtgccgcggctggggccgcgccgac
gtgatgctgcgccccgatggcacgtactccttcctcgagatgaacacgtcgccgggaatg
actgggcacagcctcgtgccgatggcggcgaaggcgacgggcctttcgtacgcggatctc
tgcgtcgagattctcgcgggcgcgtcgctcgattcgggagcgcggcaatga
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