Usitatibacter palustris: DSM104440_00778
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Entry
DSM104440_00778 CDS
T06995
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
upl
Usitatibacter palustris
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upl03400
]
DSM104440_00778
Enzymes [BR:
upl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM104440_00778
DNA repair and recombination proteins [BR:
upl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DSM104440_00778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QJR13986
UniProt:
A0A6M4H377
LinkDB
All DBs
Position
759959..762715
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AA seq
918 aa
AA seq
DB search
MSNPFPEIDRDELLERLEQGGERAVTVLTPNRRLAQSLEAEVDRRHLAAGRAHWDAADIL
AFDHFLARCHEEALYSARGADVPSLLSEAAARILWEEAIGQSRWKDGLLSLPAAAALASE
AWALAHDWRIQGALRSEQSSEDAEAFAEWATHYARRTDRENVIDSARLPASVARYWAEKM
IAPPAAIALYAFDVIKPQQADLLSTCAGMGTQVFLCQPARHEATLRRVVIETPREEIEQA
ARWARARLEAADPARAPRIAVVVPELSARRREVVRIFARTFAPNGSLASRSGAPYFNLSL
GEPLTEYPLVDAALTLLEIATQAVAYDRASRLIRSPFLADAEAEVAGRARLDAALRRIAP
GALNAVHLRRVAPEGVKRGAPPCRGFIELLERVIEKSQDNAPASAHTWARRFNEILRAAG
FPGERSLDSVEYQALERWRESLAEFAALGSIATHWSGREARARLVRLCRETVFQPRSGQA
PVQVLGILESAGLTFDHLWVSGLTEDAWPIASRAHPLIAPALQRRAGIPQASPEEALEFD
RRITTGWRVAAPEVVFSSARADGDRELVASPLVADVTKSDDLEALAIPKFIELRRQILAK
RKDAMSKTQDDIGPALPTPFAKGGTNILVDQAACPFRAFAHYRLGARELEAPASGLAPME
RGTLLHEMMGKLWEAVKDSATLVSMDDAALAKHIDEAAAHAVRKVQEDRPGRLDGRFADL
ERERIAALAREWLAIEKTRAPFRVHQREEKWKLHAGGVEIDGRIDRVDELAGGGLAVIDY
KTGRVSAADWNGERPDNAQMPLYALAADRERLHAVAFASLKTGDLRFVGVSRDENILPKV
KTPTEVQGGSWDAMLQKWRVVVDRLGADFAAGQATVDPKELLTTCRRCDLKTLCRVHERL
SPLDEGDELDDAGEEKAE
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccttccccgaaatcgatcgcgacgaactgctcgaacgcctggagcagggc
ggcgaacgtgcggtcacggtgctcacgccgaaccggcgtctcgcgcagtcgctcgaggcc
gaggtcgatcgccgccacctcgcggcgggacgcgcgcactgggacgccgcggacatcctc
gcgttcgaccattttcttgcgcgttgccacgaggaagcgctgtactcggcccggggtgcg
gacgtgccctcgctgctgtcggaggcggccgcgcgcatcctctgggaagaggcgatcggc
cagagccggtggaaggatggcctgctctcgctgccggcagcggctgcgctggcctcggag
gcctgggcacttgcgcacgactggcgcatccagggcgcgctgcgctccgagcaatcgagc
gaggacgccgaagcgttcgcggagtgggcgacgcactacgcgcggcgcacggatcgggaa
aacgtcatcgattcggcacggcttcccgcttcggtcgccaggtactgggcggaaaagatg
atcgcgccgccggcggccatcgcgctctatgccttcgatgtcatcaagccgcagcaggcg
gacctgctgtcgacttgcgcgggaatgggcacgcaagtgttcctctgccaacccgcgagg
cacgaggcgaccctgcggcgcgtggtgatcgagacgccgcgcgaggaaatcgagcaggcg
gcacgctgggctcgcgcgcgcctcgaggcggcggatcccgcgcgtgcgccgcggatcgcg
gtcgtcgtgcccgagctctccgcgcgccgccgcgaagtggtgcggatcttcgcgcgcacg
ttcgcgcccaacggctcgctggcttctcgctcgggcgccccttatttcaacctttcgctc
ggcgagccgctcaccgagtacccgctcgtcgatgcggcgctcacgctgctcgagatcgcc
acgcaggcggtcgcctacgaccgggcgagccgcctcatacgctcgcccttcctcgcggac
gcggaagcggaagtggccggacgcgcgcggctcgacgccgcgcttcgcaggattgcgccc
ggagcgctcaacgcggtgcacctgcgccgcgtcgctcccgagggcgtgaagcgcggcgcc
ccgccatgccgcgggttcatcgaactgctcgagcgcgtgatcgagaagtcccaggacaac
gcgcccgccagcgcgcacacctgggcgcggcgattcaatgaaatccttcgggcggcgggg
tttccgggcgagcgttcgctcgactcggtcgaataccaggcgctcgagcggtggcgcgag
tcgctcgccgagttcgccgcgctcggttccatcgccacgcactggagcggtcgcgaagcg
cgggcgcgactcgtgcgcctgtgccgcgagaccgtgttccagccccggtccggacaggcg
cccgtccaggtgctgggcattctcgaatccgcgggcctcacgttcgaccacctctgggtg
agcggcctcaccgaggacgcctggcccatcgcgtcgcgcgcgcatccgctgatcgcgccc
gcgctgcagcgccgcgccggcattccgcaggcaagccccgaggaggcactcgagttcgac
cggcgcatcacgacggggtggagagttgccgcacccgaagtggtcttcagcagcgcgcgc
gccgacggcgatcgcgaactcgtcgccagcccgctcgtcgcggacgtgacgaagtccgac
gacctcgaggcgctcgccattccgaagttcatcgagctgcggcgccagatcctcgcgaag
cgaaaggacgcgatgtcgaagacgcaggacgacatcggccccgcgttgccgacaccgttc
gcgaaaggcggcaccaacatcctcgtcgaccaggcggcctgccccttccgcgcgttcgcg
cactaccgcctgggcgcgcgcgagctggaagcgccggcatcgggcctcgcgccgatggaa
cggggaacgctgttgcacgagatgatgggcaagctgtgggaggcggtgaaggattccgcc
acgctcgtgtcgatggatgacgcggcgctcgcgaagcacatcgacgaagccgcggcgcac
gcggtccgcaaagtgcaggaggatcggcccgggcggctcgacggccgattcgcggacctc
gagcgcgaacggatcgcggccctcgcgcgggaatggctcgcgatcgagaagacgcgcgcg
ccgtttcgtgtccaccagcgcgaggaaaaatggaagctccacgcgggcggcgtcgagatc
gacggacgcatcgatcgcgtcgacgagttggccggcggcggcctcgccgtcatcgactac
aagacgggacgcgtgtccgcggcggactggaacggcgagcgtcccgacaacgcgcagatg
ccgctgtacgcgctggcggccgatcgcgagcggctgcacgcggtggccttcgcgagcctc
aagaccggcgaccttcgtttcgtcggcgtctcgcgcgacgagaacatcctgccgaaggtg
aagacgccgaccgaggtgcagggcggatcctgggacgcgatgctgcagaaatggcgcgtc
gtcgtcgatcgcctcggtgccgatttcgccgccggccaggcgacggtcgatcccaaggaa
ctgctcacgacgtgccggcgctgcgacctgaagacgctctgccgcgttcacgagcgcctg
agcccgctcgacgagggcgacgagctcgacgatgccggcgaggagaaagctgaatga
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