Usitatibacter palustris: DSM104440_00779
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Entry
DSM104440_00779 CDS
T06995
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
upl
Usitatibacter palustris
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upl03400
]
DSM104440_00779 (recB)
Enzymes [BR:
upl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM104440_00779 (recB)
DNA repair and recombination proteins [BR:
upl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DSM104440_00779 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
PDDEXK_1
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJR13987
UniProt:
A0A6M4H7L8
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All DBs
Position
762712..766089
Genome browser
AA seq
1125 aa
AA seq
DB search
MSEAIDIVDAAEREAALDPRRSIIVQAPAGSGKTGLLIQRFLRLLATVSKPEEVLAITFT
RKAAAEMRRRVLEAFAAARDGEKPEDENKALTWLLARDVLARDAEKRWGLLDNAARLRIQ
TIDSLCASLARQMPVLSGLGAPPAIVEDARDLYREAAQRTLARVNEGDADVARVVAHLDG
DWEMASFLLENMLSRRDQWLRRVAGVKAGGATRAALEEAMRSERSRVMQRARRILPPAIE
RDFCELVRFAASNIAIEKPHAPLAKLDKLAGYPPLDETGAGAWMEIANLLLTSPKGQEVN
VRKTVNVSQGFPAGKGPQARFKERMIELLEAFAAMDGFIEPLHALRTMPPSAFSEEQWAA
LGSVVEMLPRAAAELQVVFAERGEIDFTGIAQAAVQALGTEDEPTNLLLALDVKLQHLLV
DEFQDTSHGQWELLTRLTSGWQPDDGRTVFLVGDPMQSIYRFREADVSLFLRARSQGLPQ
VALADLRLATNFRSQAGVVEWVNKSFRAILPREEDPDEGAVPYSDSSAKHPLEPGPAVQW
HPFLGTDMALAQEREAVRVVEVVKAALVADASQTIAILVRNRSNLDSIVPAMRKANIRFR
AVEIEQLEGRQVIQDLLAVTRALSHPADRVAWLGVLRAPWCALTLADLLALTGPLLSSEG
ARETLWELMADPSKLEGVSADGRARIARVRDTLAPFIEQRLRGTLRERVESAWLALGGPA
CAFSESDLEDAETYFDQLDRLQRAGELPDVAVLAEKLQRLYAAPDTGEEARVQVMTIHKA
KGLEFDTVIVPGLHRAPRISDRPLFAWKSRADGTILMAPVRPTRMEGEPAYDYLRGLSKA
AEQHELERVLYVAATRAAKRLHLMGYARLKTEDGTIRRPPSTTLLGKAWSVAEPAFCDAI
PQFLAGAGEKKPKDTIRTDLRRLDPTRLAMEVPEPAWEPPPSPEDTSSSIAFIWVKDDAR
HVGTLTHRWLQRIAVEGLASWDASRIAALAQRVTRELASRGVAPEDLPRATSRVIDSLQG
AISDPRGRWVLAPYADARCEYRIRVAGPDGVRLLVIDRIFTEGDRRWIVDYKTSSHEGGE
LEAFLDSERTRYSEQMARYAPAFDGAAGSMGLYFPLVKGWREWTA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggccatcgacatcgtcgatgccgccgagcgcgaagccgcgctcgacccgcgc
cgctcgatcatcgtccaggcccccgccgggtcgggcaagacgggcctgctcatccaacgc
ttcctgcggctgctcgcgacggtgtcgaagcccgaggaggtgctcgcgatcacgttcacg
cgcaaggccgcggcggaaatgcggcggcgcgtgctcgaggcattcgccgcggcccgcgat
ggcgagaagccggaggacgagaacaaggcgctgacctggctgctcgcccgcgacgtgctc
gcgcgcgatgcggagaaacgatggggactgctggacaacgccgcgcgccttcgcatccag
acgatcgattcgctctgcgcctcgcttgcgcggcagatgcccgtgctctcgggcctgggc
gcgccgcccgcgatcgtcgaggatgcgcgcgacctctatcgcgaagcggcgcagcgcacg
ctggcacgcgtgaacgaaggcgatgcggacgtcgcgcgcgtggtcgcccacctcgacggc
gattgggagatggcgagcttcctgctcgagaacatgctttcgcggcgcgaccagtggctg
cgccgcgtcgcgggcgtgaaggccggcggcgcgacgcgcgcggcgctggaggaggcgatg
cgcagcgaacgctcgcgggtcatgcagcgcgcgcgccgcatcctgccgcccgcaatcgaa
agggatttctgcgagctcgtgcgctttgcggcgagcaacatcgcgatcgaaaagccgcac
gccccgctcgcgaagctcgacaagctcgcaggctatccgcccctcgacgagacgggcgcc
ggggcgtggatggagatcgcgaacctcctgctgacctcgcccaagggccaggaggtcaac
gtccgcaagacggtgaacgtctcgcagggcttcccggcgggcaaggggccgcaggcgaga
ttcaaggagcggatgatcgagctcctcgaagccttcgccgccatggacggcttcatcgaa
cccttgcacgcgctgcgaaccatgccgccgtccgcgttcagcgaggagcaatgggccgcg
ttgggctcggtcgtcgagatgctcccgcgcgcggccgcggagctgcaggtcgtgttcgcc
gaacgcggcgagatcgacttcaccggcatcgcgcaggccgcggtccaggcgctcggcacg
gaggacgaacccacgaacctcctcctcgccctcgacgtgaagctccagcacttgctcgtg
gacgaattccaggacacgtcgcacgggcagtgggagcttctcacgcggctcacctccggt
tggcagcccgacgacgggcgcacggtgttcctcgtgggcgatccgatgcagtcgatctac
cggttccgcgaggccgacgtgtcgctgttcctgcgcgcccgcagccaggggttgccgcag
gtagccctcgcggacctgcgactcgcgaccaacttccgttcccaggccggcgtggtcgag
tgggtcaacaagagcttccgcgcgatcctcccgcgcgaggaagatccggacgagggcgcg
gtgccgtactccgattcgagtgcgaagcatccgctggaaccgggaccggcggtgcaatgg
catcccttcctcgggaccgacatggcgctcgcgcaggagcgcgaggcggtgcgcgtcgtc
gaagtggtgaaggccgcgctcgtggcggacgcgtcacagacgatcgcgatcctcgtgcgc
aaccgctcgaacctcgacagcatcgtgccggcgatgcgcaaggcgaacatccgcttccgg
gccgtggagatcgaacaactcgaggggcgccaggtcatccaggatcttctcgcggtcacg
cgcgcgctttcgcatccggccgatcgcgtggcctggctcggcgtgctgcgcgcgccgtgg
tgcgcgctcacgctcgccgacctgctcgcgctgaccgggccgctgctgtcgagcgaaggc
gcgcgcgagacgctgtgggagctgatggcggatccgtcgaagctcgagggtgtgtccgca
gatggccgcgcgcgcatcgcccgcgtgcgcgacacgcttgcgccgttcatcgaacagcgc
ctgcgcggcacgctgcgcgagcgcgtggaatccgcgtggctcgccctggggggccccgcg
tgcgcgttctccgaatccgatctcgaggacgcggagacctatttcgaccagctcgatcgg
ctgcagcgtgcgggcgagttgccggacgtggcggtccttgccgagaagctgcagcgcctc
tacgccgcgcccgacaccggcgaggaagcgcgcgtccaggtgatgacgatccacaaggcg
aagggcctggagttcgacacggtgatcgtgccgggcctgcatcgcgcgccgcggatttcg
gaccggccgctcttcgcgtggaaatcgcgtgccgacggcacgatcctcatggcgccggtg
cggcccacgcggatggaaggagaaccggcctacgactacctgcgcgggctttcgaaagcc
gccgagcagcacgagctcgagcgcgtgctctacgtggctgcgacgcgcgccgcgaagcgg
ctgcacctcatgggctacgcacggctgaagacggaggatggaacgatccgccgtccgccc
agcacgacgctcctcggcaaggcgtggtcggttgcggagccggccttttgcgacgcgatc
ccgcagttcctcgccggcgcgggcgagaagaagcccaaggacacgatccgcacggacctg
cgcaggctcgatcccacgcggctcgcgatggaagttcccgagcccgcctgggagcctccg
ccctcgccggaggacacgtcgtcgtcgatcgccttcatctgggtgaaggacgatgcgcgc
cacgtgggcacgctcacgcaccggtggctgcagcgcatcgcggtcgagggcctcgcgtcc
tgggacgcgtcgcggatcgcggcgctcgcgcagcgcgtgacgcgagaactcgcatcgcgc
ggcgttgcgccggaggacctgccgcgcgcgacttcgcgagtgatcgattccctgcagggc
gcgatctccgatcctcgcggacgctgggtcctcgctccgtacgccgacgcccgctgcgag
taccgcatccgcgtcgcaggccccgacggcgtgcggctgctggtgatcgatcgcatcttc
accgagggcgatcggcgctggatcgtcgattacaagacctcgtcgcacgaaggcggcgag
ctcgaagccttcctcgacagcgagcgcacgcgctattcggagcagatggcgcgttacgcg
cccgcgttcgacggcgcggccggcagcatgggcctgtacttcccgttggtgaagggatgg
cgggagtggacggcgtga
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