Usitatibacter palustris: DSM104440_01285
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Entry
DSM104440_01285 CDS
T06995
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
upl
Usitatibacter palustris
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
upl03016
]
DSM104440_01285 (truB)
Enzymes [BR:
upl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DSM104440_01285 (truB)
Transfer RNA biogenesis [BR:
upl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSM104440_01285 (truB)
Prokaryotic type
DSM104440_01285 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
WH_Lhr
Motif
Other DBs
NCBI-ProteinID:
QJR14487
UniProt:
A0A6M4H8Z0
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All DBs
Position
1269248..1270162
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AA seq
304 aa
AA seq
DB search
MRRDEGPSGILLLDKPAGVTSTRALAITKRLLASRKGGHTGTLDPFATGLLPLAFGEATK
FSRFLLDADKGYLATLVLGQTSSTGDIEGSLSPKLDIDVDADRIAEVTASFVGEQDQIPP
MYSALHYEGRRLYELAREGVEVPRAPRRVTIHTLEVGEIVGEKVTISVKCSKGTYIRTLA
EDIGKRLGLGAYLCALRRTHVGDLHLSDAVTLEHLEQADPTARSLRLMPPERFVERLPRV
SLDAAGAAAFCHGQRVNQTGAEGEVTVFREAGDFLGVGRRDGAGGLFAVRLMAGTPKADS
PDFA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgggacgagggtcctagcgggatactgcttctcgacaagcccgccggcgtcact
tccacccgggccttggccatcacgaagcgcctgctcgcctcccggaagggtgggcacacg
ggaacgctcgatccattcgcgacaggcctgctgccactcgctttcggcgaagcgaccaag
ttctcgcgattcctcctcgatgccgacaagggctacctcgcaacgctggtcctcgggcaa
acgagctccacgggtgacattgaaggctccctttcgccaaagctcgatatcgacgtagat
gccgacaggatcgccgaagttacggcctcctttgtgggtgagcaggatcagataccccct
atgtactcggccttgcactacgaggggaggcgcttgtacgaactggcccgggagggggtg
gaggtcccgagggctccgcggagggtgaccatccacaccctcgaagtgggtgagatcgtc
ggcgaaaaggtcacaatttcggttaagtgctcaaaggggacttacatccgaactttggcc
gaagacatcggaaagcgtctcggcctcggcgcctatctatgcgcgctgcggcgaacccac
gtcggtgatcttcacctgtccgacgctgtgaccctggagcacttggaacaggcggacccc
accgcacgatccctgcggctgatgcccccggagcgcttcgtcgagcgcctgccgcgggtc
tcgctggatgccgccggtgcagcggccttctgccacggccagcgggtcaatcaaacaggc
gccgagggggaagtcacggtcttccgcgaggccggagacttccttggcgtggggcgccgg
gacggcgccggagggctttttgccgtccgcctcatggccggcactcccaaggccgactcc
cctgattttgcttga
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