Usitatibacter palustris: DSM104440_01407
Help
Entry
DSM104440_01407 CDS
T06995
Symbol
ruvB_2
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
upl
Usitatibacter palustris
Pathway
upl03030
DNA replication
upl03430
Mismatch repair
upl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM104440_01407 (ruvB_2)
03430 Mismatch repair
DSM104440_01407 (ruvB_2)
03440 Homologous recombination
DSM104440_01407 (ruvB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
upl03032
]
DSM104440_01407 (ruvB_2)
03400 DNA repair and recombination proteins [BR:
upl03400
]
DSM104440_01407 (ruvB_2)
Enzymes [BR:
upl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM104440_01407 (ruvB_2)
DNA replication proteins [BR:
upl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM104440_01407 (ruvB_2)
DNA repair and recombination proteins [BR:
upl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM104440_01407 (ruvB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
DNA_pol3_tau_5
AAA_5
AAA_16
AAA_22
AAA_14
AAA_30
AAA_18
AAA_19
PIF1
TsaE
AAA_28
nSTAND3
Mg_chelatase
Sigma54_activ_2
AAA_7
AAA_2
Rad17
AAA_assoc_2
DEAD
AAA_24
RsgA_GTPase
ABC_tran
Herpes_Helicase
SKI
RNA_helicase
NACHT
Motif
Other DBs
NCBI-ProteinID:
QJR14605
UniProt:
A0A6M4H5Z3
LinkDB
All DBs
Position
1396266..1397912
Genome browser
AA seq
548 aa
AA seq
DB search
MTYQVLARKWRPRAFEELVGQAHVVTALANALASKRLHHAYLFTGTRGVGKTTLARILAK
ALNCETGITPKPCGKCGACTQIDSGRFVDLLEVDAATNTKVDEMRELLENAQYMPTVGRF
KIYIIDEVHMLSKSAFNSMLKTLEEPPEHVKFILATTDPQRLPVTVLSRCLQFNLKPLAP
PVIAGHLKRVLEAEGIPFEDAALAHLSKAAAGSVRDSLSLLDQAIAHGGGRVAAAQVAEM
LGSVGGDLVWPLLECVVAGDGPGAMREAERIAGRSIDFDTALEDLASLLHRIALVLAGID
PPADESDTPRLKAIAARLDNSRVQVLYQIAVLGRRDLPLAPDEFAGFSMSVLRMLSFSGG
NAEGRSVARPTPAVAAPTPSRSAAPVAAAVNVPAAPAPARATSAPVASEPVAAIPFDGDW
PAFVARLQLTGMAGLLARYGELASFNNNNLELVVPEAHRAYSERNYQDKLKAELAKHFGA
NFRLTVKTGATSGVSLAAVREKQSEERQATAATAIEADPFVRDLVRDMGAEVVPSSIRPS
GNDNGPTS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcccgcaagtggcgtccccgggccttcgaggaactcgtcggc
caagcccacgtcgtcacggcactcgccaacgcgctcgcctcgaagcgtctccaccacgcg
tatctattcaccggaacgcgcggtgtgggcaagaccacgctcgcgcggatcctcgccaag
gcgctgaactgcgagaccggcatcacccccaagccgtgcggcaagtgcggggcctgcacg
cagatcgacagcggccgcttcgtcgacctcctcgaggtggacgccgcgaccaacaccaag
gtcgacgagatgcgcgagcttctcgagaacgcgcagtacatgcccacggtcggccgcttc
aagatctacatcatcgacgaagtgcacatgctctcgaagtccgccttcaattcgatgctg
aagacgctcgaggaaccgcccgagcacgtgaagttcatcctcgccacgaccgatccgcag
cgcctgccggtgacggttctgtcgcgctgcctgcaattcaacttgaagccgcttgcgcca
ccggtcatcgccgggcacctgaagcgcgtgctcgaagcggaaggcattccctttgaagac
gccgcgctcgcgcacctctcgaaggccgcggctggaagcgtgcgcgacagcctgagcctg
ctcgaccaggcaatcgcccacggtggtggacgcgttgccgccgcgcaggtcgccgagatg
ctggggtccgtcggtggcgatctcgtgtggccgctgctcgaatgcgttgtcgccggtgat
ggtcctggcgcgatgcgcgaggccgagcgaatcgccggacgcagcatcgatttcgatacc
gcgctggaagatctcgcgtcgctgctgcatcgcatcgcgctggtactcgcgggcatcgat
ccgcctgcggacgaaagcgacacgcctcgcttgaaagccattgctgcgcgcctcgacaac
tcgcgcgtgcaggtcctctatcagatcgccgtgctcggccgccgcgaccttccgctcgcg
cccgatgagttcgccgggttctcgatgtccgttcttcgcatgctgtcgttctccggtggc
aatgcggaagggcggtctgtcgcaagacccacgcctgccgtcgccgcgcccacgccgagc
cgatccgctgcgccggtcgcagcggctgtgaacgtgcctgctgcacctgcacctgcgcgc
gcaacctcggcacccgttgcctcggagcccgtggccgcaatccctttcgatggcgattgg
cccgcgttcgtcgcgcgcctgcaacttaccggaatggcggggctgctcgcgcgctacggc
gagctggcgtcgttcaacaacaacaacctggagcttgtcgtgcccgaagcgcatcgcgcc
tattcggaacgcaattaccaggacaagctgaaggccgagctcgcgaaacatttcggcgcg
aacttccggctcacggtgaagacgggcgcaaccagcggtgtgagcctcgcggccgtgcgc
gaaaagcaaagtgaagagcggcaggccactgccgcgacggccatcgaggcggatcccttc
gtgcgcgatctggtgcgcgacatgggcgccgaggtggttccctcatccatacggccgtcc
ggcaacgacaacggccccaccagctaa
DBGET
integrated database retrieval system
