Usitatibacter palustris: DSM104440_01486
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Entry
DSM104440_01486 CDS
T06995
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
upl
Usitatibacter palustris
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
upl03016
]
DSM104440_01486 (truA)
Enzymes [BR:
upl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DSM104440_01486 (truA)
Transfer RNA biogenesis [BR:
upl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSM104440_01486 (truA)
Prokaryotic type
DSM104440_01486 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CATSPERE_NTD1
NinB
Motif
Other DBs
NCBI-ProteinID:
QJR14676
UniProt:
A0A6M4H502
LinkDB
All DBs
Position
1497287..1498090
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AA seq
267 aa
AA seq
DB search
MRMALGIEYDGTAFCGWQTQPGGCGVQDHLQAALSRFADAPIEVTAAGRTDAGVHATGQV
VHFDTDAVRENVSWVRGPNTFLDPRVRVVWAKTVPDDFHARYSARSRTYHYLLLDDPVAP
AALHDRVGWFHLPLDVGAMKYAAKSLVGEHDFSAFRDAQCQAKSPVRDVYEVRVERVRSL
VIFTLRANAFLHHMVRNIVGSLVYVGAGRQPETWLLELLEGRDRKLAAPTFAAEGLYLSA
VEYDSAFALPAFRRNALLEVARVVDGS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatggcactcggcatcgagtacgacggcaccgccttctgcgggtggcagacgcag
ccgggcggctgtggcgtgcaggaccacctgcaggccgcgctgagccgctttgccgacgca
cccatcgaagtcaccgccgcgggccgtacggacgccggagtccacgctacagggcaggtc
gtgcacttcgacaccgacgctgtgcgcgagaacgtctcgtgggtgcgcggacccaacacc
ttcctcgatccccgggttcgggtcgtgtgggccaagaccgtgccggatgacttccacgcg
cgctacagcgcccgctcgcgcacgtaccactacctcctgctggatgaccccgtggcaccc
gccgcgctgcacgatcgcgtgggctggttccacctgccgctcgatgtcggggcgatgaag
tacgcggcgaagtcgctcgtgggcgagcacgatttcagcgccttccgcgatgcgcaatgc
caggcgaagagcccggtgcgggacgtttatgaggtgcgcgtggagcgcgtgcggagcctc
gtcatctttacgctgcgggccaatgcgtttctccaccacatggtgcgcaacatcgtgggt
tcgcttgtgtacgtgggtgcgggccggcagcccgagacctggctcctggagctgctcgaa
gggcgcgatcgcaagctcgccgcgcccacgttcgccgccgagggcttgtacctctcggcc
gtcgagtatgattccgcgttcgcgttgccggccttccgccgcaacgcattgctcgaagtc
gcccgggtagtcgatggttcctga
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