Usitatibacter palustris: DSM104440_01983
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Entry
DSM104440_01983 CDS
T06995
Symbol
lcfB_3
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
upl
Usitatibacter palustris
Pathway
upl00280
Valine, leucine and isoleucine degradation
upl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DSM104440_01983 (lcfB_3)
Enzymes [BR:
upl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
DSM104440_01983 (lcfB_3)
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Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QJR15166
UniProt:
A0A6M4H6A7
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Position
complement(2034312..2035820)
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AA seq
502 aa
AA seq
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MDANLYTLFESRFPADRSAPLLHLDHGRVLTYAEAEATSARYASFFAGLGLAPGDRVAVQ
VEKSPEALLVYLACLRAGLVYLPLNSAYQAKEVAYFLDNAEPGAVITQSASIPWLQPLAA
ARGIKNLFTLTANGQGTFVQATKSAASTFATVPRDPDDLAAILYTSGTTGRSKGAMITHR
NLGSNAEVLHKAWGFGPADVLVHMLPLFHVHGLFVACHCVLMNGTSMRFHAKFDADRALA
EFRTSTVFMGVPTFYTRLLESPDLTKDACANMRLFISGSAPLLAETHIAFEERTGQRILE
RYGMTETGMLTSNPLEGDRRAGTVGPPLPGTEVRVIDEAGGHCEPGDIGQIEVRGPNVLT
GYWRLPEKNKEEFTPDGFFRTGDVGTFSHDGYLSIVGRSKDLIITGGYNVYPKEVEIALD
ELPGVHESAVVGVPHKDFGEAVTAIIVAKAEAKPSEADVIAALRARLANFKVPKRVYFVE
ELPRNAMGKVQKNVLRDRYSGG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaatctctacacactcttcgaatcccgttttcccgccgatcgctcggcgccg
ctcctccacctcgatcacggccgggtcctgacgtatgccgaggccgaagcgacgagcgca
cggtatgcatcgttcttcgcgggccttggcctcgcgcccggcgaccgcgttgccgtgcag
gtggagaagtcgcccgaggcattgctggtctacctcgcgtgcctgcgcgcgggactcgtc
taccttccgctgaactccgcctaccaggcgaaggaagtcgcgtacttcctcgacaacgcc
gaacccggtgccgtcatcacgcagtccgcgtcgattccgtggctgcaaccgcttgcggcc
gcgcgcggcatcaagaacctcttcacgctgaccgcgaacgggcaggggactttcgtccag
gcgaccaagagtgcggcgagcacgttcgcaactgtcccgcgcgatccggacgatctcgcc
gcgatcctctacacctcgggaacgacgggccgctcgaagggcgcgatgatcacgcaccgc
aacctcggttcgaatgccgaggtgttgcacaaggcgtggggattcggcccggccgatgtg
ctggtgcacatgctgccgctgttccacgtccacggtcttttcgtcgcctgccactgcgtg
ctgatgaacggcacgtcgatgcgcttccacgcgaagttcgacgccgaccgcgcgctcgcg
gagttccgcacctcgacggtcttcatgggcgtgccgaccttctatacgcggctgctcgaa
tcgcccgatctcacgaaggacgcctgcgcgaacatgcgcctcttcatctcggggtcggcg
ccgctgctcgcggagacgcacatcgccttcgaggagcgcacggggcagcgcatcctcgag
cgctacggcatgaccgaaaccgggatgctgacctccaatccgctcgaaggcgatcgccga
gcgggcacggtgggcccgccgctgccgggcaccgaggttcgcgtgatcgacgaagccggc
ggccattgcgagcccggcgacatcggccagatcgaggtccgcggcccgaacgtgctcacc
ggctactggcgcctccccgagaagaacaaggaagagttcacgcccgacggcttcttcagg
acgggcgacgtcggcacgttctcgcacgacggctacctctcgatcgtcgggcgctcgaag
gatctcatcatcactggcggctacaacgtctatccgaaggaagtggaaatcgcgctcgac
gagctgcccggcgttcacgaatccgcggtggtcggtgtgccgcacaaggatttcggcgaa
gcggtcacggcgatcatcgtcgcgaaggccgaagcgaaacccagtgaagcggatgtgatt
gcggcactcagggcccgccttgcgaacttcaaggtgcccaagcgggtctacttcgttgag
gagcttcccaggaacgcgatgggcaaggtccagaagaacgtgctgcgcgatcgttactcg
ggaggatga
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