Usitatibacter palustris: DSM104440_01998
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Entry
DSM104440_01998 CDS
T06995
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
upl
Usitatibacter palustris
Pathway
upl00061
Fatty acid biosynthesis
upl00071
Fatty acid degradation
upl01100
Metabolic pathways
upl01212
Fatty acid metabolism
upl02024
Quorum sensing
upl04146
Peroxisome
Module
upl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DSM104440_01998 (fadD)
00071 Fatty acid degradation
DSM104440_01998 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DSM104440_01998 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSM104440_01998 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
upl01004
]
DSM104440_01998 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
upl04147
]
DSM104440_01998 (fadD)
Enzymes [BR:
upl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DSM104440_01998 (fadD)
Lipid biosynthesis proteins [BR:
upl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DSM104440_01998 (fadD)
Exosome [BR:
upl04147
]
Exosomal proteins
Exosomal proteins of breast milk
DSM104440_01998 (fadD)
Exosomal proteins of breast cancer cells
DSM104440_01998 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
gag-asp_proteas
Motif
Other DBs
NCBI-ProteinID:
QJR15181
UniProt:
A0A6M4H6C4
LinkDB
All DBs
Position
complement(2051870..2053543)
Genome browser
AA seq
557 aa
AA seq
DB search
MEKVWLKSYPPGVPAEIDVREYASIRDIFEKSCAKFASLPAYSCMGRTITYAELERQSRD
FGAWLQARGLEKGDRIAIMMPNVLQYPVALFGALRAGFTVVNCNPLYTPRELEHQLVDSG
AKAIVILENFAKTLEAVLPKTPVKTIVTTQLGDMHGFPKSLIMNFVVKRVKKMVPEWNLP
GTVTFPAVLSAGAGLKLAEPPLNHGDIAFLQYTGGTTGVSKGAMLTHGNIVANLLQTSAW
WGVGLREGREIIITALPLYHIFALTGNCLTFMKIGAHNVLITNPRDFAGFVKELGTWRFT
CFTGVNSLFNALLNTPGFDKLDFSGLHMSLGGGMAVQRAVAERWKQVTGKPLLEAYGLTE
TSPGACINPMVDGAEYNGYCGLPISSTTVTIRDDDGKILALGETGEICIAGPQVMKGYWN
RPEETAKVMTSDGSFRTGDIGIMNSEGFVKIVDRKKDMILVSGFNVYPNEVEDVVAMMPG
VLEVCAVATPDDKSGEVVRAVIVRKDPALTRDQVIEHCKQNLTGYKVPKVVEFWKELPKT
NVGKVLRREVKNAPLRV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtctggctgaagtcctacccgccaggggttcccgcggagatcgacgtccgc
gaatacgcaagcatccgcgacatcttcgagaagagctgcgccaagttcgcttccctgccg
gcctactcgtgcatgggcaggacgatcacgtacgccgagctcgaacgccaatcccgcgat
ttcggcgcctggctgcaggcgcgcggcctggagaagggcgatcgcatcgcgatcatgatg
cccaacgtcctccagtaccccgtggcgctcttcggcgcgctgcgcgcgggtttcacggtg
gtgaactgcaatccgctctataccccgcgagagctcgagcaccagctcgtcgactcgggc
gccaaggcgatcgtcatcctcgagaacttcgccaagacgctcgaagccgtcctccccaag
acgccggtgaagacgatcgtcaccacgcagctgggcgacatgcatggcttcccgaagtcg
ctgatcatgaatttcgtggtgaagcgagtgaagaagatggttcccgagtggaacctgccc
gggaccgtgaccttccccgcggtgctgtcggccggcgcgggcctgaagctcgccgagcct
ccgctgaaccacggcgacatcgcgttcctccagtacaccggcggcacaacgggtgtctcg
aagggcgcgatgctcacgcacggcaatatcgtggcgaacctgctccagacctcggcgtgg
tggggcgtgggcctgcgcgagggcagggaaatcatcatcacggcgctgccgctgtatcac
atcttcgcgctcaccggaaattgcctcaccttcatgaagatcggcgcgcacaacgtgctg
atcaccaatccacgcgatttcgcgggcttcgtgaaggagctcggcacctggcgcttcacc
tgcttcaccggcgtgaattcgctattcaatgcgctgctcaacacgccgggcttcgacaag
ctcgacttctccggcctgcacatgtcgctgggcggcgggatggccgtgcagcgcgcggtg
gccgaacgctggaagcaggtgaccggcaagccgctgctcgaggcctacggcctgaccgag
acgtcgccgggtgcgtgcatcaatccgatggtcgatggcgcggagtacaacggctactgc
gggctgccgatctcgtcgactaccgtcacgatccgggacgacgacggcaagatcctcgcg
ctcggggagactggggagatctgcatcgccggaccgcaggtgatgaagggctactggaat
cgcccggaggaaaccgcgaaggtgatgacctcggacggttcgttccgcaccggcgacatc
ggcatcatgaattccgaggggttcgtgaagatcgtcgaccggaagaaggacatgatcctg
gtctcgggcttcaacgtgtatccgaacgaggtcgaggatgtcgtcgcgatgatgcccggc
gtcctcgaggtctgcgcggtcgctacacccgacgacaagtcaggcgaagtcgtgcgcgcc
gtgatcgtccgcaaggatcccgcgctcacccgcgaccaggtgatcgagcactgcaagcag
aacctcaccggctacaaggtcccgaaggtggtggagttctggaaggaactgccgaagacc
aacgtcggcaaggtcctgcgccgcgaagtgaagaacgcgccgctcagagtctag
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