Usitatibacter palustris: DSM104440_02122
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Entry
DSM104440_02122 CDS
T06995
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
upl
Usitatibacter palustris
Pathway
upl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DSM104440_02122 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
upl03019
]
DSM104440_02122 (rnc)
03009 Ribosome biogenesis [BR:
upl03009
]
DSM104440_02122 (rnc)
03036 Chromosome and associated proteins [BR:
upl03036
]
DSM104440_02122 (rnc)
Enzymes [BR:
upl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DSM104440_02122 (rnc)
Messenger RNA biogenesis [BR:
upl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSM104440_02122 (rnc)
Ribosome biogenesis [BR:
upl03009
]
Eukaryotic type
90S particles
RNase
DSM104440_02122 (rnc)
Prokaryotic type
rRNA processing factors
DSM104440_02122 (rnc)
Chromosome and associated proteins [BR:
upl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DSM104440_02122 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
LPP20
Motif
Other DBs
NCBI-ProteinID:
QJR15303
UniProt:
A0A6M4H996
LinkDB
All DBs
Position
complement(2199220..2199978)
Genome browser
AA seq
252 aa
AA seq
DB search
MPRLHGDHREVSPEPPEVAALERALGHRFGDAALAIRALTHRSFGSPNNERLEFLGDSLL
NCAVATLLYERYPQLPEGDLSRLRAQLVNQGSLFEAAQRLGLGDCLRLGEGELKSGGFRR
PSILADALEALLGAIFLDAGFEAVRAAVARLMEPALAAADQKPVHKDPKTALQEHLQGRK
LPLPRYTVQVIEGEAHDQAFTVECRVDDLSLAGTGKGPSRRAAEQAAAAEVLTLIEQQVQ
EKREAKSTGKKK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcgacttcacggcgaccaccgcgaagtaagccccgagccgccggaggtcgccgca
ctcgagcgagcgctcggccaccggttcggcgatgcggcgctcgccatccgggcgctgacc
caccgcagcttcggttcgcccaacaacgagcgtctcgagttcctgggcgacagcctgctc
aactgcgcggtcgcaacccttctctacgaacgttatccccagttgcccgagggcgatctc
tcgcggctgcgcgcgcagctcgtgaaccagggctcgctcttcgaagcggcgcagcgcctg
ggcctgggcgattgcctgcgactgggcgagggcgagctgaagagcggcgggtttcgccgt
ccgtccatcctcgccgacgcgctcgaggcgcttcttggcgcgatcttcctcgatgcgggc
ttcgaagcggtgcgcgccgcggttgcccgcctcatggaaccggcgctcgccgccgccgac
cagaagcccgtgcacaaggatcccaagaccgcattgcaggagcacctgcaggggcgcaag
cttcccctgccgcgctacacggtgcaggtgatcgaaggcgaggcccacgaccaggctttc
acggtcgaatgccgcgtcgatgacctttcgctcgcgggcaccggcaagggtccgagccga
cgcgccgccgagcaggccgcggccgccgaggtcctcacgttgatcgagcagcaggtgcag
gaaaagcgcgaagcaaaatccacaggaaagaagaaatga
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