Usitatibacter palustris: DSM104440_02283
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Entry
DSM104440_02283 CDS
T06995
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
upl
Usitatibacter palustris
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
upl03032
]
DSM104440_02283
03400 DNA repair and recombination proteins [BR:
upl03400
]
DSM104440_02283
Enzymes [BR:
upl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DSM104440_02283
DNA replication proteins [BR:
upl03032
]
Prokaryotic type
DNA Topoisomerases
DSM104440_02283
DNA repair and recombination proteins [BR:
upl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DSM104440_02283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QJR15462
UniProt:
A0A6M4H7W6
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All DBs
Position
2369320..2370387
Genome browser
AA seq
355 aa
AA seq
DB search
MTTPSTPLRFSSDAQPGYARIRRGERFAYRDSRGRAVRDAEAILRIRSLAIPPAWTDVWI
SPDERGHLQATGRDARGRKQYRYHPHYRAEREAGKFSHLREFGEALPAIRAQVRADLARD
GMPREKVLAILVQLLERTAIRVGSEKYVRANDSFGLTTFRNKHVKVRGPRIEFDFRGKGG
KAHRIAIDDPRLAQLVRRCRDLPGYELFQYVDESGVRRSIGSDDVNEYLRDISGAEITAK
VFRTWIGSVCAACALARAPDPLARAALTGAIERASALLGNTPTICRKSYIHPSVLVPADW
VPRLPARRKRHPGLSADEALLMNALAIAEESAKPRKPKARNYKASRRRSAEPARA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccttcaacgccgttgcgcttttcgagcgacgcacagcccggctacgcgcgt
atccggcgcggggagcgctttgcctaccgcgattcccgcggccgtgccgtccgcgatgcc
gaggcgatcctgcgcatccgctcgctcgcgatccctccggcgtggaccgatgtctggatc
agccccgacgagcgcggccacctgcaggccacgggccgcgatgcccgcggacgcaagcag
tatcgctatcacccgcactatcgcgccgagcgcgaggccggcaagttcagccacctgcgc
gaattcggcgaggcgctccccgccatccgcgcgcaggttcgcgccgatctcgcgcgcgac
ggaatgccccgcgagaaggtgcttgcgatcctcgtgcagttgctcgagcgcaccgcgatc
cgcgtaggcagcgagaagtacgtgcgcgcgaatgattccttcggcctcaccacgtttcgc
aacaagcacgtgaaggttcgcgggccgcgcatcgagttcgacttccgcggcaaaggcggc
aaggcgcaccgcatcgcgatcgacgatccgcgcctcgcgcaactcgtgcgccggtgccgc
gacctgcccggctatgagctcttccaatacgtcgatgaatccggcgtgcgccgctcgatc
ggctccgacgacgtgaacgaatacctgcgcgacatctccggtgccgagatcaccgccaag
gtcttccggacctggatcggcagcgtgtgcgccgcgtgcgccctcgcgcgcgcgcccgac
ccgcttgcccgcgcagcgctcaccggtgcgatcgaacgggcctcggcgttgctcggcaac
acgcccacgatctgccgcaagagctacatccacccctccgtgctcgtaccggcggactgg
gtgccgcgcctgccggcccggcgcaagcgccaccccggcctgagcgccgacgaggccttg
ctgatgaacgcgctggcgatcgcggaagaatctgcaaagccgcgcaagccgaaggcccgg
aactacaaagcgtcgcgccggcgttccgcggaacccgcgcgggcctga
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