Usitatibacter palustris: DSM104440_02297
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Entry
DSM104440_02297 CDS
T06995
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
upl
Usitatibacter palustris
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
upl03009
]
DSM104440_02297 (rimO)
Enzymes [BR:
upl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DSM104440_02297 (rimO)
Ribosome biogenesis [BR:
upl03009
]
Prokaryotic type
ribosomal protein modification factors
DSM104440_02297 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QJR15476
UniProt:
A0A6M4H7A1
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All DBs
Position
complement(2384244..2385563)
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AA seq
439 aa
AA seq
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MKSAPRVGFVSLGCPKALVDSEQILTQLRAEGYEIAPTYEGSDLVVVNTCGFIDSAVEES
LEAIGEALAENGKVIVTGCLGAKGTIVRDTFPNLLAVTGPHARDEVMTAVHAHLPKPHDP
FVDLVPPAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGDVLTEAEALAKS
GVKELLVISQDTSAYGVDVKYRTGFWGGKPVRTRMTELCQALATLGIWVRLHYVYPYPHV
DEVIPLMADGKILPYLDVPFQHASPRILKLMKRPASSEKNLERIHAWREACPEITLRSTF
IVGFPGETEAEFEELLAFLREARLDRVGCFAYSPVEGARANDLPDPVPEALREERRARFM
EVQGEISRQRLAEKVGRTLDVLVDSVEGAVAYARSSADAPEIDGIVQVKGAKGAKPGDFL
RVKVTRASEHDLEARAVSG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagcgcgccccgggtcggcttcgtttcgctcggctgcccgaaggcgctggtcgat
tccgagcagatcctcacccagctgcgcgccgaaggctacgagatcgcgccgacgtacgag
ggctccgacctcgtcgtcgtgaacacctgcggcttcatcgattccgcggtcgaggaatcg
ctcgaggcgattggcgaagcgctcgcggaaaacggcaaggtcatcgtgacgggctgcctg
ggtgcgaagggcacgatcgttcgcgacaccttcccgaacctgctggccgtcaccggtccg
cacgcgcgcgacgaagtgatgaccgcggtgcacgcgcatctacccaagccgcacgatccg
ttcgtggacctcgtgccgccggccggcgtgaagctcacgccgcgccactacgcgtacctc
aagatttccgaaggctgcaatcaccgctgcacgttctgcatcattccctcgatgcgcggc
gatctcgtgagccgccccgtgggcgacgtgctcacggaagccgaagcgctcgcgaagagt
ggcgtgaaggagttgctcgtgatctcgcaggacacgagcgcgtacggcgtggacgtgaag
taccgcaccggcttctggggcggcaagcccgtgcgcacgcgcatgacggagctgtgccag
gcgctcgcgacgctgggcatctgggtgcgcctgcactacgtgtatccctatccgcacgtc
gacgaggtgatccccctcatggccgacggcaagatccttccctatctcgacgtgcctttc
cagcacgcgagcccgaggatcctcaagctcatgaagcgtcctgcatcctccgagaaaaac
ctggagaggatccacgcgtggcgcgaagcctgtccggagatcacgctgcgctccacgttc
atcgtggggttccccggcgagaccgaagcggaattcgaggagctgctcgcgttcctgcgc
gaggcgcggctcgatcgcgtcggttgctttgcgtattcgcccgtcgagggcgcgcgcgcc
aacgatcttcccgacccggtgcccgaggcgctgcgcgaagagcgccgcgcgcggttcatg
gaagtgcagggcgagatcagccgccagcgcctggccgagaaggtcggccgcacgctcgac
gtgctggtcgattcagtcgaaggggccgtcgcctacgcgcggagcagcgcggatgctccg
gagatcgacgggatcgtgcaggtgaagggcgccaagggcgcgaagcccggcgatttcctg
cgcgtgaaagtgactcgggcctccgaacacgacctggaggcccgggcggtctcgggctga
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