Usitatibacter palustris: DSM104440_03054
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Entry
DSM104440_03054 CDS
T06995
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
upl
Usitatibacter palustris
Pathway
upl03030
DNA replication
upl03430
Mismatch repair
upl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM104440_03054 (polC)
03430 Mismatch repair
DSM104440_03054 (polC)
03440 Homologous recombination
DSM104440_03054 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
upl03032
]
DSM104440_03054 (polC)
03400 DNA repair and recombination proteins [BR:
upl03400
]
DSM104440_03054 (polC)
Enzymes [BR:
upl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM104440_03054 (polC)
DNA replication proteins [BR:
upl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM104440_03054 (polC)
DNA repair and recombination proteins [BR:
upl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM104440_03054 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Optomotor-blind
Motif
Other DBs
NCBI-ProteinID:
QJR16225
UniProt:
A0A6M4HAS0
LinkDB
All DBs
Position
3166554..3167231
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AA seq
225 aa
AA seq
DB search
MSTPRFWEAAWQRIGRWIPTLHAPGNAALADVRFVVVDTETSGFNTRSDRLLSIGACAVK
GGRIDLAETFYRELRQEQPSDDANILVHGIGRAAQLSGEVRADALRAFLDFASGDPLVAF
NAKFDQAFLARSMRQDLGERFAAEWFDLATLPRGLYPDAARSRRTLDDWLAHFGIDSLER
HHALGDAFVTAELLLVVLAKARAEGFADLGGLRRAARLGVSTAPT
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgccgcgattctgggaggccgcctggcaacgcatcggccgctggatcccgacc
ttgcatgcgcctggcaacgcggcccttgccgacgtgcgcttcgtcgtggtcgataccgag
acgagcgggttcaacacgcgcagcgaccgcctgctgtcgatcggggcctgcgcggtgaag
ggcgggcgcatcgacctcgcggagacgttctatcgcgagctcaggcaggagcagccgagc
gacgacgcgaacatcctcgtgcatggcatcgggcgcgcggcccagctctcgggtgaagtg
cgcgccgacgccctgcgcgcgttcctcgatttcgcgagcggcgatccgctcgtggccttc
aacgcgaagttcgaccaggcgtttctcgcgcgttcgatgcgccaggacctcggagaacgc
ttcgccgccgagtggttcgacctcgccacgctgccgcgcgggctctatcccgatgccgcc
cgctcgcggcgcacgctcgatgactggctggcccacttcgggatcgactcgctcgaacgc
catcacgcgctgggcgacgcgttcgtgacggcggagctgctgctggtggtgctggcgaaa
gcgcgcgccgaagggttcgccgatctcggcggcctgcggcgcgcggcgcgactcggagtc
tctacagcaccgacttga
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