Usitatibacter palustris: DSM104440_03442
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Entry
DSM104440_03442 CDS
T06995
Symbol
xerD_2
Name
(GenBank) Tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
upl
Usitatibacter palustris
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
upl03036
]
DSM104440_03442 (xerD_2)
Chromosome and associated proteins [BR:
upl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
DSM104440_03442 (xerD_2)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_M
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QJR16607
UniProt:
A0A6M4HEZ3
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All DBs
Position
complement(3572484..3573395)
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AA seq
303 aa
AA seq
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MKALCAADRALLDRFGDALWLNDGLAKNTLAAYGRDLGQFCLWMRANLDRAPLEAAAPDL
QRHLAWQVEEKHAKPRTTGRLVSSLKRFYQFAVREGLRTDDPTADLEGPKLPRSLPKSMS
EEDVESLLAAPSTETAQGVRDRAMLETLYASGLRVSELVTLKTVQVNLDMNVIRVIGKGS
KERITPLGEEAGDWIRRYQQGARGELLAGKKSDALFITARGGPMTRQAFWGLVKRHAKAA
DIRQAISPHTLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLKALHRKHH
PRG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctttgcgcggctgaccgcgcgctcctcgatcgcttcggcgatgcgctgtgg
ctcaacgacggcctcgcgaagaacacgctcgccgcctacggccgcgacctcgggcaattc
tgcctctggatgcgcgcaaacctcgatcgcgcgccgctcgaagccgccgcgcccgacctg
cagcgccacctcgcctggcaggttgaagagaagcacgccaagccgcgcaccaccggacgc
ctcgtgtcttcgctcaagcgcttctaccagttcgcagtgcgcgaaggcctgcgcaccgac
gatccgacggcggacctcgaagggccgaagctgccgcgctcactgcccaagtcgatgtcg
gaggaagacgtcgagtcgctgctggccgcgccttcgaccgaaaccgcgcagggcgttcgt
gatcgcgcgatgctcgagaccctttacgcgagcgggctgcgcgtctcggaactggtgacg
ttgaagaccgtgcaggtgaacctcgacatgaacgtgattcgcgtgatcggcaagggctcc
aaggagcgcatcacgccgctcggggaagaggccggagactggatccgccgctaccagcag
ggcgcgcgcggcgagctgctcgccggcaagaagtccgatgcgctcttcatcaccgcgcgc
ggcgggccgatgacgcgccaggcgttctgggggctcgtgaagcgtcacgcgaaagctgcc
gacatccgccaggcgatctcgccccacacgctgcgccacgcgttcgcgacacaccttctc
aaccacggcgcggacctgcgcgtcgtgcagatgctgctgggccacgccgatatctcgacc
acgcagatctacacgcacgtggcgcgcgagcggttgaaggcgctgcatcgcaagcaccac
ccgcgcggatga
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