Ureaplasma parvum serovar 3 SV3F4: UP3_c0154
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Entry
UP3_c0154 CDS
T03673
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
upr
Ureaplasma parvum serovar 3 SV3F4
Brite
KEGG Orthology (KO) [BR:
upr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
upr03019
]
UP3_c0154
03009 Ribosome biogenesis [BR:
upr03009
]
UP3_c0154
Enzymes [BR:
upr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UP3_c0154
Messenger RNA biogenesis [BR:
upr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UP3_c0154
Ribosome biogenesis [BR:
upr03009
]
Prokaryotic type
rRNA helicases
UP3_c0154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
PhoH
AAA_22
Arc_C
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAO73461
LinkDB
All DBs
Position
196746..198077
Genome browser
AA seq
443 aa
AA seq
DB search
MKFNSNYQKWILDSLINQKIFEPTPIQLKTMPLIAKRENIIGVAPTGTGKTLAFVLPILN
NLDLSQKLQVIIITPTRELARQIFSKIIVFKKHQPLLQVKMLIGGESIDQQINSQLNKSQ
LLIATPTRLKQILTRQILDLHHVNALVFDEADMLMDLGFISDLEFINSQFTNKDVQKISF
SATLHEMLSIQLKKYFKNTKIINISNSIYENKKITHYVIHNHDKWHSLSIIMKTIKPYLC
IIFANTKKEVEAIYQYLIQQNKNVCILHGSLLQRERKNNYRDIKNNKFQYVVASDIASRG
LDIDGVSHIINWNLPTENEWYIHRAGRSGRGKYSGESYVLYDQKEHDKLLNLSKKGIIFH
HKFIKENELFDKEFLFKKKNQFKDLKTQNEIQKIISTTSTKIKPGYKKKIKEAIQKINQK
NKRSHIEKKMNAHRIRGYKLKNS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatagtaattatcaaaaatgaattcttgattcattaattaaccaaaaaatt
ttcgaaccaacacctattcaattaaaaacgatgccattaatcgctaaaagagaaaatatt
attggcgttgcaccaacagggacagggaaaactttagcctttgttttgcctatattaaac
aacttagatttatctcaaaaactgcaagttataattattactcccactcgtgagttagct
cgccaaatttttagtaaaattattgtttttaaaaaacatcaaccacttttacaagttaaa
atgttaattggtggtgaaagtattgaccagcaaattaattcacaattaaataaaagccaa
ctgcttattgcaactccaacgcgtctaaaacaaattttaacacgacaaattcttgattta
caccatgttaatgcacttgtttttgatgaagctgatatgttaatggatcttggttttatt
agtgatttagagtttattaactcacaatttacaaataaagatgtacagaaaataagtttt
agcgctacactgcacgaaatgttatcgatccaattaaaaaaatattttaaaaatacaaag
attattaatattagtaattcaatttatgaaaataaaaaaataacccattatgttattcat
aatcacgacaaatgacattcattatctataattatgaagactattaaaccttatttatgt
atcatttttgcaaatacaaaaaaagaagttgaagcaatttatcaatatttaattcaacaa
aataaaaatgtttgcattttgcatggctcactacttcaacgtgaacgaaaaaacaactat
cgtgatattaaaaataataaatttcagtatgttgttgcctcagatattgcaagtcgtggt
ttagatattgatggtgtaagtcatattattaattgaaatttgcctactgaaaatgaatga
tacattcaccgtgcaggacgtagtggtcgtggtaaatatagtggagaatcatatgtttta
tatgatcaaaaagaacatgataagttattgaatttatcaaaaaaaggaatcatctttcac
cataaattcattaaagaaaatgagttatttgataaagaatttctttttaagaaaaaaaat
caatttaaagatttaaaaacacaaaatgaaattcaaaaaataatctcaacaacaagtaca
aaaataaaaccaggatataaaaagaaaattaaagaagctattcaaaaaattaatcaaaaa
aacaaacgctctcatatcgaaaagaaaatgaatgctcaccgaattcgtggatataaatta
aaaaatagttaa
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