Ureaplasma parvum serovar 3 SV3F4: UP3_c0479
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Entry
UP3_c0479 CDS
T03673
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
upr
Ureaplasma parvum serovar 3 SV3F4
Pathway
upr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
upr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UP3_c0479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
upr03021
]
UP3_c0479
03400 DNA repair and recombination proteins [BR:
upr03400
]
UP3_c0479
Enzymes [BR:
upr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UP3_c0479
Transcription machinery [BR:
upr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UP3_c0479
DNA repair and recombination proteins [BR:
upr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UP3_c0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAO73786
LinkDB
All DBs
Position
complement(635721..636704)
Genome browser
AA seq
327 aa
AA seq
DB search
MRKFLKYQLDVPSINSEDKNRTVVKIAPLEIGFGDTLGNALRRICLSSIPGASMFAVKFG
GYSHEFQPYEGVKEDITHIILNLKNLAIKIDELIYSEDYFNNLLIDKWPKMKINFKGPGV
ITAKDIVCPVGFEIVNQDLYIAEVTKPIDVEIEIFAKTGRGRVDFNTNKDFVSTLHIIAT
DSNYSPVLHYAYNVEMIKDSKSSMSEILTIDIATNGTISGSEAIAIAAKIMQAHLEPIVN
IDKTINEMIIMREREEEEKRQNASISIDDLDLTVRAYNALKQSGINTTAELIELTKSQLE
KIKNLGRKSVTEIIQKLTERSLELKKD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaatttttaaaataccaacttgatgtgccatcaattaatagcgaagacaaaaat
cgtacagttgttaaaattgccccacttgaaattggttttggtgacacattaggaaatgcc
ttacgtcgaatttgtttatcatcaattcctggtgcctcaatgttcgctgttaaatttggg
ggatattcgcatgaatttcaaccatacgaaggtgttaaagaagacattactcacatcatt
ttaaacttaaaaaatttagcaattaaaattgatgaattaatttatagtgaagactatttc
aacaatttattaattgataaatgaccaaaaatgaaaattaatttcaaaggacctggtgtg
attacagctaaagatattgtatgtccagtaggttttgaaattgttaaccaagacttatat
attgcagaagtaacaaaaccaattgatgtagaaattgaaatttttgcaaaaacaggacgt
ggtcgtgtcgattttaatacaaataaggattttgtttcaacactacatattatcgcaacc
gattcaaattattcaccagttctacattacgcttataatgtagaaatgattaaagattca
aaatcatcaatgtctgagattttaacaattgacattgcaacaaatggtacgatatcagga
agcgaagcaattgcgattgctgctaagattatgcaagcgcatttagaaccaatcgtgaac
attgataaaacaattaatgaaatgattattatgcgtgagcgtgaggaagaagaaaaacgt
caaaacgcttcaatttcaattgatgatttagatttaacggtgcgtgcatataatgcttta
aaacaatcaggtattaataccactgctgaattaattgaattaacaaaatcacaacttgaa
aaaattaagaatttaggacgtaaatcagttactgaaattattcaaaaattaactgaacgt
tcacttgagttaaaaaaagattaa
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