Undibacterium parvum: EJN92_01330
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Entry
EJN92_01330 CDS
T05754
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
upv
Undibacterium parvum
Pathway
upv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EJN92_01330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upv03400
]
EJN92_01330
Enzymes [BR:
upv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EJN92_01330
DNA repair and recombination proteins [BR:
upv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EJN92_01330
Prokaryotic type
EJN92_01330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AZP10784
UniProt:
A0A3Q9BN59
LinkDB
All DBs
Position
complement(298435..299265)
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AA seq
276 aa
AA seq
DB search
MSTAKAAKQFPALIQHALTRVHPSWLPALVQGLNAMQETSPGYLDSLQEGAFLPDSGRLF
AAFALPLTSVNYVLVGEGPYPRAESATGVCFMDGAVRELWSQDAQAGLSKKVNRATSLRN
FIKMLLVADARLDAGNTTVVAMAAVAAAARLPGSDLIQDLTELQDNLGKQGFLLLNASLV
FRPEVAPAKDALAWRVFLQAVFAALDQRQKNEQGKKILLVLWGKIAEQIKHIPASAELAS
ICSEHPYNLSFISNQVMQDFFAPMHLLIRQPSIDNN
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgccaaagctgctaaacaatttcctgccttgatccagcacgccctaacacga
gtacatccatcctggttgccggctttagtccagggcttaaatgcgatgcaagagactagc
cccgggtatctcgatagcttgcaagagggcgcttttttgcccgactcggggcgcctgttt
gccgccttcgctttgcctctcacgagcgtcaattatgtcttggtcggcgaggggccgtat
ccacgcgctgagagtgctactggcgtttgttttatggacggtgccgtgcgcgaactctgg
tctcaggatgcgcaagcgggcctctcaaaaaaagtcaatcgcgctacttccttgagaaat
ttcatcaaaatgttattggtcgccgatgcccgtctcgatgccggcaataccaccgtagtc
gcgatggcagcggtggctgctgcggcgcgcttgccgggctccgatctcatccaagacctg
acagagttgcaggataatttaggcaagcaaggatttttattactcaatgccagtttagtc
tttagacctgaggtggcaccagccaaagatgcactggcctggcgggtatttttgcaagcc
gtgtttgctgctttagatcagcggcaaaaaaatgagcaaggcaaaaaaatactgctggtg
ttgtgggggaagattgccgagcagattaagcacattccagccagtgccgaattggccagt
atctgttccgagcatccgtataatttaagcttcatcagcaaccaagtcatgcaggatttt
tttgcgcccatgcatttgctgatacgccagccatccatagacaacaactga
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