Undibacterium parvum: EJN92_02365
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Entry
EJN92_02365 CDS
T05754
Name
(GenBank) DEAD/DEAH box helicase
Organism
upv
Undibacterium parvum
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AZP10958
UniProt:
A0A3S9HFT2
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All DBs
Position
complement(530841..534938)
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AA seq
1365 aa
AA seq
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MTQQSDLYDLSALSSEQFPLVYAMALFDAPLSQGALLELLHSHHQPDAQGAPYTSALIKE
CLTSLCKNLLVRQEIGLGYMLREDLRMAVLLHLQQTGTIKSWVKSVRDLLKRHGEYRQWK
PFNVAFCRREVMFSVLASNNQEVMEWREKFYQCPSNEHIPPSTVFFANADGLALFATLHP
VSQDLMLSDLLVVANWKLSACTTAYEYACQHAPTHLKSWPGSLALLCLQAQLRGDFQQLF
DLQLGLSPVQQQDSMFVTALQRGEFAAALEISEILIKVRKAETGKRKIFIADLPGLLYTV
ALLATNTAASLKRAKEQVDEGVRHQNAFAYLYLQPLVHHLALGVPLAIPHKFIRVERDVD
GLFEGLALYWQDAPKDKKMHDKLVDLRSYCQRLGYHWVVAELDVLLQTQYGDAALLPDWH
AAHQIKPLLGALHREETWQRALTALSQLKSGAAVAAPSGSDVRIAWSLELQHGLVQLDPR
EQKRSAKGVWSKGRAVALKRLAHEQDSLPGMSEQDKRLATCVRKTYDNYYGGSEYEMHAE
KALSFLIGHPAVFWSDAPDVRIDIIKGEITLQLKEKGGLISLQLDPPMMAEAVVSWRKET
PTRLAVYASSPEIKQIAGILGTGLTVPSAAKAQLVDVIAAIAPHLSIHSDLPELAQHISS
IPANPVLFAHLLPLKDGLRLQILVRPLADGGWFAPGKGSANVLGEQEGVAVQASRSLKDE
QKSLKQVIATCSALEQAEESDEEWQLQDPELCLELLGQLKALPEGVLELVWPEGERFRLK
GSRTLQNMRLTIKKQGEWFVAGGELTLDDGRVLALRELMHLAEGATGRFLKLGDNDYLAL
TDNFRKRLAELRALSDLVGKDGVRINPLAAPALAELAAEVGELQADSAWREQVVKLDSLA
DFVTTVPSTLQAELRDYQLEGYQWLARLAHWGVGACLADDMGLGKTVQALALLLDRAPNG
PALVVAPISVAMNWQAEVARFAPTLKVRAYHSNRSLADLGPFDIVIASYGMLQSDAEVFS
AQHWHSVVLDEAQVIKNAATKRSQAAMALTADFKMIASGTPVENHLGELWNLFRFINPGL
LGSKERFAERFSNPIERGDKPARLHLKKLIQPFILRRTKTQVLSELPSRTEITLQVELSV
EERHLYEALRQEAIIKIANLKTGDGQSLQVLAEITKLRRFCCNPKLVLKNSNVAGSKLSV
FAETVEELLDNRHKALVFSQFVDHLAIVREWLDQQGISYQYLDGSTPALERKKRVDAFQA
GQGDIFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAHRMGQLRPVTIYRLVA
QDTIEEKIIALHAQKRDLADSLLDGGDAAGRMDTAALLRLLKESV
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacagtccgatctgtacgatctctcggcactcagctccgagcaatttcctctg
gtgtatgcgatggcgctgtttgatgcgcctttaagccagggcgcgctgctggaactactg
cacagccatcatcagcctgatgcgcagggcgcaccgtatacctcggccttgattaaagaa
tgtctcactagcctgtgcaagaatctgctggtacgtcaggagataggcctggggtacatg
ctgcgcgaagatttgcggatggcggttttattgcatctgcagcagaccggcacaatcaag
agttgggtcaagagcgtgcgcgatttgctcaagcggcatggcgagtaccgccagtggaaa
ccgtttaacgttgccttctgtagacgcgaagtgatgttttcggtgctggcatcgaataat
caagaggtgatggaatggcgcgaaaaattctatcagtgcccaagtaatgagcacattccg
ccaagtacggtgtttttcgccaatgccgatgggctagccttgtttgccacgctgcatccg
gtcagccaggatttgatgctcagtgatttgctggtggtggccaactggaaactcagtgcc
tgtaccacggcgtatgaatatgcctgtcagcatgcgcctacgcatctgaaatcctggccc
ggcagcttagccctgctttgcctgcaagcccaattgcgcggcgattttcagcaattattt
gacttgcagctggggctgagcccggtacaacagcaagatagtatgtttgtcacggcgttg
cagcgcggtgaatttgctgccgcgctggagatctccgaaatcctgattaaagtacgtaaa
gcggaaaccggcaagcgcaaaatttttatcgccgatttacccggcttgttatacaccgtg
gccttgctggcgaccaataccgctgccagcttgaagcgcgccaaagaacaagtcgatgaa
ggcgtcaggcatcaaaatgcctttgcctatttgtatttacaaccgctggtacatcatctg
gcgttgggcgtgccgctggccattccacataaatttatacgggtagagcgcgacgtcgat
ggtctgtttgaaggtttggcactgtattggcaagatgcgcctaaagacaaaaaaatgcac
gacaaactggtcgatttgcgcagctattgccaacgcctgggctatcactgggtggtggct
gagctggatgttttattgcagactcagtacggcgatgcagcgctactacctgactggcat
gccgcgcatcagatcaagcctttgctgggtgcgctacatcgcgaagaaacctggcagcgc
gctttaactgccttatcccaactgaaatctggtgccgcagtggccgcacctagcggcagc
gatgtgcgcatcgcctggtcgctggaactgcaacatggcttggttcagctcgatccgcgt
gagcaaaaacgtagtgccaaaggggtctggagtaagggccgcgccgtggcactgaaacgc
ctggcacatgagcaagatagcctgcccggcatgagcgagcaagacaagcgtctagccacc
tgcgtacgtaaaacctatgacaattactacggcggcagcgagtacgagatgcatgccgaa
aaagccctgagctttttgattggccaccccgctgtgttttggtcggatgcgccggatgtg
cgtatcgacatcatcaagggcgagatcaccttgcaactcaaagagaagggcggtttgatt
agcctgcagctagacccaccgatgatggcagaggccgtggttagctggcgtaaagaaacc
ccgactcgcttagcagtgtacgcctctagccccgagatcaaacagatcgccggtattctt
ggtacaggtctgaccgtgcctagcgccgccaaggcgcagctggtcgatgtgatcgctgcg
attgcaccgcatctgtctatccattctgatttaccggagttggcccagcacatcagcagc
atccccgccaaccctgtcttgtttgcgcatttactgcctttaaaagacggcttgcgtctg
caaattttggtgcggccgctggccgacggtggctggttcgcgcccggcaaaggttcggct
aatgtgctcggtgaacaagagggggttgcggtgcaagcgagccgctctttaaaagacgag
caaaaatcgctcaagcaagtgattgccacttgtagcgctttagagcaggccgaagaaagc
gacgaggaatggcaattacaagatccagaactctgtctggaattacttggtcaactcaaa
gcgctgccggaaggcgtgttggaattggtgtggcccgagggcgagcgcttccgcctaaaa
gggagccgcactttacagaacatgcgattaaccattaagaagcagggcgaatggtttgtc
gctggcggtgagctgactttagatgatggcagggttttggcgctgcgtgaactgatgcac
ttggcggaaggcgcgaccggacgtttcctcaaattgggcgacaacgattatctggcgctg
accgataacttccgcaaacgtctagccgagttgcgtgccttgagtgatttagtcggcaaa
gacggcgttaggattaatcctctggcagcccctgctctggccgaattggcggccgaagtc
ggtgaattgcaagccgatagcgcctggcgcgaacaagtcgtcaagctcgatagtctggcc
gattttgtgactaccgtgccatcgactttgcaagccgaactgcgcgactatcagctggaa
ggctatcaatggctggctagactagcgcattggggtgtcggcgcctgtctggccgatgat
atgggtttgggcaaaaccgtgcaggcgctggcgctgttattagaccgcgccccgaacggg
cctgccttggtggtggcaccgatctcggtggcgatgaactggcaagccgaagtcgcccgc
tttgccccgactctgaaagtgcgcgcttaccatagcaatcgctcgctggcggatctcggt
cctttcgatatcgtgatcgccagttatggcatgttgcagtcggacgcagaagtgtttagc
gcgcagcactggcatagcgtggtgctggatgaggcgcaagtgatcaagaacgccgccact
aaacgcagccaggcggcgatggctttgaccgccgattttaaaatgatcgctagcggtacg
ccggtagagaaccatctgggcgagttatggaatctatttcgcttcatcaatcccggcctg
ctgggatcgaaagagcgctttgccgaacgctttagtaacccgatagaacgtggcgataaa
ccggcccgtttgcacctgaaaaaattgatacagcctttcattttgcgccgcaccaagacc
caggtcttgagcgagctgccgtcgcgcaccgagatcactctgcaggtagaactcagtgtg
gaagagcgccatctgtatgaggcactcaggcaagaagccatcataaaaatcgccaactta
aaaactggcgacggccaatccttgcaagtgctggccgagattaccaagctgcgccggttc
tgctgcaaccccaaactggtgctgaaaaattcgaatgtggcgggtagcaagttgtctgta
tttgccgagacggtagaggagctactggataatcgccataaggcgctggtgttcagccag
tttgtcgatcatctggcgatcgtgcgtgaatggctggatcagcaagggatttcttatcaa
tatctggacggcagcaccccggcactagagcgcaaaaaacgggtcgatgcctttcaggcc
gggcagggcgatatcttcctgatcagcttgaaagccggtggcacgggtctgaatttaacc
gctgccgattacgtgattcatctcgatccatggtggaatccagcggtagaagatcaagct
tcagaccgcgcccatcgcatggggcaattgcggccggtgacgatttaccgcttggtggcg
caagacaccatagaagaaaaaatcatcgccctgcacgcgcaaaaacgcgatctggccgac
agcctgctagacggtggcgacgccgccggccgcatggataccgcggccttgctacgctta
ttgaaggaaagcgtctaa
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