Undibacterium parvum: EJN92_02665
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Entry
EJN92_02665 CDS
T05754
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
upv
Undibacterium parvum
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
upv03036
]
EJN92_02665 (xerD)
Chromosome and associated proteins [BR:
upv03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
EJN92_02665 (xerD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
Phage_int_M
Motif
Other DBs
NCBI-ProteinID:
AZP14373
UniProt:
A0A3S9HQH2
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All DBs
Position
complement(597477..598400)
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AA seq
307 aa
AA seq
DB search
MDTATPVIVLPAQVQAQIDAFCDNLWLEDGLAKNSLEAYRRDMRLFAEWLQQKNEKHLYQ
VNETDIFAYIAEKHSASKATSANRRMSVLKRFYQMAFRQNLIAANPCTKLKSAKQANRLP
KTLSEKQVEVLLLAPDVNTALGLRDRTMLELLYACGLRVTELVSLAALDMSLNDGVLRIT
GKGNKTRLVPFGEVARTWLERYLREGRAVILDGQIDDALFVTARGGAMTRQMFWVLIKKY
ASQAGIVAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLH
AQHHPRG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atagatacagccacgcctgtcatcgtattgccggcacaagtgcaggcgcaaattgatgcg
ttttgcgacaatctctggctagaagatggcttggctaaaaactctctggaagcgtatcga
cgtgatatgcgcctatttgccgagtggctgcagcaaaaaaacgaaaaacatctgtatcaa
gtgaatgagacggatattttcgcctacattgccgagaagcatagcgcatcaaaagccact
tccgcgaatcgccgtatgagcgtactcaagcgcttttatcaaatggctttcaggcaaaat
ctgattgccgctaatccctgtaccaaactcaagtcggcgaagcaagcgaatcgcttacct
aaaacattgagcgaaaaacaggtcgaggtcttactgctggcaccggacgtaaatactgcc
ttgggtttgcgtgatcgcaccatgctcgaattgttatatgcctgtggcttacgtgtgacg
gagctggtgtctttggcggcgctcgacatgagtcttaatgatggtgtcttgcgcattacc
ggcaaagggaataaaactcgcttggtgccttttggtgaagtcgccagaacctggctggag
cgctatttgcgcgagggcagggcggtgattttggatggacagattgatgacgccctgttt
gtgacggcgcgcggtggcgctatgaccagacaaatgttttgggtgctgataaaaaaatat
gccagtcaggctggcatagtcgcgcccttatcaccacataccctgagacatgcatttgct
acccatctattaaatcacggtgccgatttaagggtggtgcaattactgctggggcatgcc
gatatttcgacgactcagatttacacccatgttgcgcgcgagcgtttaaaacaattacac
gcgcaacatcatcctaggggctag
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