Undibacterium parvum: EJN92_04780
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Entry
EJN92_04780 CDS
T05754
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
upv
Undibacterium parvum
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
upv03000
]
EJN92_04780
Transcription factors [BR:
upv03000
]
Prokaryotic type
Helix-turn-helix
Other families
EJN92_04780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
GAF
Sigma54_activ_2
AAA_lid_14
HTH_29
AAA_5
HTH_28
HTH_7
HTH_30
AAA_2
PAS
HTH_23
HTH_22
HTH_17
PAS_9
HTH_1
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
AZP11377
UniProt:
A0A3Q9BPC5
LinkDB
All DBs
Position
1135657..1137651
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AA seq
664 aa
AA seq
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MPTPLPALTLRQARLHLQEYGHCPSGIINERLLRSWQRSLAAGLQPVGGLRQTEHASGDE
LRQVLERNHELLSYSRPVMEYLFESVRDSQSVVVLADNRGTLMHTLGDAGFLNKAERVAL
ASGASWHEDHRGTNAIGTALAETSEVEIHGAEHFLEHNGFLTCAAAPIMAADGSLMGILD
ISGDRHSGHPHTLNLVSMAVRMIENRLIVAGSKRQIRLHFHVHPEGIGTIAEAIVVLSED
GWIIGANRAALGLLHLGAHDLGAVQITSVLNVRLEHLLSQQNARAPQTITVHSHDGTRLA
MQVHLDHSVLPAVSRRSTEAVATPYAAEDALSLLDSGDLRWRSAAEKTRRILDKPIPLII
QGESGVGKEFFAKAAHDSGPRCNGPFVAINCAAIPENLIEAELFGYQPGAFTGARREGSL
GRLREANGGTLFLDEIGDMPLPMQSRLLRVLQERSVTPLGGGKTVAVDFALICATHCKLR
EQAEQGKFRYDLYYRINGLTVQLPALRERSDFQALTTQILRSLSPQQELHLKPGLLAQLA
AHPWPGNLRQYSSVLRTAIAMLNPDETGIELAHLSDDIVEDLMLSAAANQAINPAVNPAM
NATVNTAINQAINQTGATLPITQNLEQLSRKAIELALNSSRGNISQAARSLGISRQTLYR
KINH
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaccactacctgcgctgacgctgcgccaggcacgactgcatttgcaagagtat
ggccactgcccttccggcatcatcaacgagcgcctgctgcgttcatggcagcgcagtctg
gcagcaggtttgcagccagttggcggcttgcgccaaaccgagcacgccagtggggatgaa
ctacgccaagtgctggaacgcaaccatgaactcttgtcttactcgcgcccagtaatggaa
tacctgtttgagtctgtgcgcgatagccaaagcgtggtggtacttgccgacaatcgcggc
accctcatgcatacgctgggtgacgcaggattcttaaacaaggcagagcgtgttgcctta
gccagcggcgcttcctggcacgaggatcatcgtggcaccaatgccatcggcaccgccttg
gcggagaccagtgaagtcgagattcacggcgccgaacactttctcgaacataacggcttt
ctcacctgcgccgccgcccctatcatggctgccgatggtagtttgatgggaatactcgat
atttccggcgatagacacagcggccatccgcataccttaaatttagtcagcatggcggtg
cgcatgatagaaaaccgcctgatcgtggctggcagcaagcgccagattcgcctgcatttc
cacgtacatccagaggggataggcacgattgccgaggcgatcgtggtgctctcggaagac
ggctggataatcggtgccaatcgtgccgcgctgggcttgctgcatcttggcgcacacgac
ctgggcgcagtacaaattaccagcgtgcttaatgtacgcctggaacatctgctttctcag
cagaacgcacgcgcaccgcaaacaattacggtgcatagtcatgacggcacccggttagcc
atgcaggtacatctggatcacagcgtactgccagccgtttcacgcagatcaactgaggca
gttgctaccccttatgcagctgaagacgccttgtctttactcgatagcggtgatctgcgt
tggcgcagtgccgccgagaaaacccgccgcattctggataagccgatacctttgattatt
cagggcgaatctggcgtcggcaaagagttctttgccaaggctgcgcatgacagcgggccg
cgctgtaacgggccttttgtcgcgattaactgcgcggcgattccggaaaatctgatagag
gccgaattatttggctatcagcccggtgccttcaccggggcgcgacgcgaaggcagtttg
ggccgcttgcgggaagccaacggtggcacgctgtttctcgatgaaatcggtgatatgccg
ctccccatgcaaagcagattattacgcgtgctgcaagagcgcagcgtcacgcccttgggc
ggcggaaaaacagtcgcagtagattttgcgctgatctgcgccacccactgcaaattgcgc
gagcaggcagaacagggcaagtttcgttacgatctgtactaccgcatcaatggcttaacc
gtgcagttgccggccttgcgcgagcgcagcgattttcaggctttgacgacgcaaattttg
cgtagcctcagtccccagcaagaactgcatctgaagccagggctgctcgcgcaattagct
gcacatccttggccgggcaatctacgccaatattccagcgtcttacgcactgccattgcg
atgctcaatccagatgaaaccggtatcgaactggcgcacctgtcagatgatatcgtcgag
gatctaatgctgtccgcggcagcgaatcaggccatcaatcctgctgtaaatcccgctatg
aatgctactgtgaatacggctataaatcaggcgataaatcagaccggcgcgacgctccct
atcactcaaaatctagagcaactttcgcgcaaggcgatcgaactagccttaaattctagc
cgaggcaatatcagtcaggcggcacgcagccttgggatcagccgtcaaacgctgtatcgc
aaaatcaatcactga
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