Undibacterium parvum: EJN92_05820
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Entry
EJN92_05820 CDS
T05754
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
upv
Undibacterium parvum
Pathway
upv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EJN92_05820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upv03400
]
EJN92_05820
Enzymes [BR:
upv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EJN92_05820
DNA repair and recombination proteins [BR:
upv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EJN92_05820
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJN92_05820
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJN92_05820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AZP14442
UniProt:
A0A3Q9BU08
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All DBs
Position
1377768..1379198
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AA seq
476 aa
AA seq
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MHDYSFLWHDYETFGAQARRDRPAQFAAIRTDADLNEIGEPIMLYCQPAPDFLPDPQSCL
ITGITPQECLERGVPEYQFAATIEQAFSQPGTIGVGYNTIRFDDEITRFMFWRNLIDPYA
REWQNDCGRWDLLDVVRTTYALRPDGIYWPTNAEGKPSFRLEHLAAANGLAHEAAHDALS
DVRATIALAKLIRQHQPKLFEFCLSLRKKEKVATEIGLPLKKAFLHVSGMIPAERGCITA
VWPLALHPQNKNEVIVWDLNYDPSELFTLDAASIKLRMFSKADALPEGVSRLPIKSIHLN
KSPIVISNLKTLSADRAAHWGLDMQLVQSHAKLAEGAPDMSSIWQQIFSRNTETGVDVDE
DLYGGFVGNNDRRTLTDLRAMTPAELASTHPQFQDGRLKELLFRYRARNFPSTLSSQEQQ
QWQRHIAARLLDGAAKALTVEQFFDRIDSLQESADERAEEILGALYDYAEQITPVR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcacgattacagctttctttggcacgactacgaaaccttcggcgcgcaggcgaggcgc
gatagaccggcccaatttgccgccatccgtaccgacgccgatctgaacgaaatcggcgaa
cccatcatgctgtattgccagcccgcgcccgactttttaccagatccgcaatcctgcctg
atcaccgggattacgccgcaagaatgcctggaacgcggagtaccagaataccaatttgca
gcgactatcgaacaagcattttcacagccagggaccataggtgtaggctacaacaccata
cgcttcgatgacgagatcacgcgcttcatgttctggcgcaatctgatcgatccgtatgcg
cgcgaatggcaaaatgactgcgggcgctgggatctactcgatgtggtgcgcaccacttac
gcactcagaccggatggcatatactggccgaccaatgcggaaggcaaacctagttttcgc
ctcgagcatttagctgccgccaatggcctggcgcacgaagcagcccacgatgccttatcc
gacgtgcgtgccaccatcgccttggccaaactgatacgccagcatcaacccaaattattc
gaattttgcctgtccttgcgcaagaaagaaaaagtagcgacggagatcggtttgcctctc
aaaaaagccttcctgcacgtatcgggcatgataccggctgagcgtggttgcattacggca
gtttggccactcgcgctgcatccacagaacaaaaacgaagtgatcgtctgggatctcaat
tacgaccctagcgaattatttacgctcgatgccgccagcattaaactgcgcatgttcagc
aaggccgatgcgctaccagaaggcgtcagccgtttgccgatcaagagcatacatctgaat
aaatcgcctatcgtcatcagtaatctaaaaaccctgagcgcagatcgtgccgcccattgg
gggctagatatgcagttagtccagagtcatgccaagctcgccgagggtgcgccagacatg
tctagcatctggcagcagatattctcacgcaacaccgaaacgggcgttgatgtggatgag
gatttatacggtggctttgttggtaacaacgacaggcgcacgttgaccgacttgcgcgcc
atgacgccggcggagttagccagcacacatccacagtttcaagatggccgcctcaaagaa
ctgctgtttcgctatcgcgcacggaattttccgtccactttatccagccaggaacaacag
caatggcagcgccatatcgcagcacgattgctggatggcgctgccaaggctttaacggta
gagcagttttttgatcgcatcgacagcttgcaagaaagcgcagacgagagagctgaagaa
atactgggagcgctgtacgattacgccgagcaaattaccccggtccgctag
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