Undibacterium parvum: EJN92_05835
Help
Entry
EJN92_05835 CDS
T05754
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
upv
Undibacterium parvum
Pathway
upv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EJN92_05835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
upv03021
]
EJN92_05835
03400 DNA repair and recombination proteins [BR:
upv03400
]
EJN92_05835
Enzymes [BR:
upv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EJN92_05835
Transcription machinery [BR:
upv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EJN92_05835
DNA repair and recombination proteins [BR:
upv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EJN92_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF7219
Motif
Other DBs
NCBI-ProteinID:
AZP11560
UniProt:
A0A3S9HHH2
LinkDB
All DBs
Position
complement(1382001..1382978)
Genome browser
AA seq
325 aa
AA seq
DB search
MQNNLFKPRIIDVEMLGAGHAKVVMEPFERGFGHTLGNSLRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVDILLNLKGIVFKVHNRDEVTLTLKKDGEGPVLASDIDLPHDVEL
INPDHVIANLTVGGKLDMQIKVEKGRGYVPGNVRRLSEDANKTIGRIILDASFSPIRRVS
YSVESARVEQRTDLDKLIINIETNGVISPEEAIRQSARVLVDQLNVFAALEGTEAAAEAP
SRAPAVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLSLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaatctgtttaaaccacgtattattgatgttgaaatgctaggtgccggtcat
gcgaaagttgtgatggagccgttcgaacgtggttttggccacactttgggcaactcgctg
cgccgtgtattgctgtcctctatggtgggttacgcaccaacagaagttactatcgctggt
gttgtacatgaatattcgacgctcgatggtgttcaagaagacgtcgtcgacatcttgttg
aacctgaaaggtatcgtcttcaaagtgcataaccgcgatgaagtcaccttgacattgaaa
aaagatggcgaaggtccagttttggcttcggatatcgatttgccacatgatgttgagtta
atcaatccagatcacgtgatcgcaaacttaaccgttggcggcaagttggacatgcagatc
aaggtcgaaaaaggccgtggttatgtgccaggtaacgtccgtcgtctgtctgaagatgcg
aacaagacaattggtcgtatcattttggatgcgtctttctcaccgattcgccgcgtttct
tactcggttgaatcagcgcgtgtagaacagcgtactgatctggataagttgatcatcaat
atcgaaacaaatggcgtgatttcacctgaagaagcaattcgtcagtcggctcgtgttttg
gttgatcaattgaacgtcttcgctgctctggaaggtactgaagccgctgcagaagcgcca
tcacgtgcacctgcggttgatccagttctgttgcgtccagttgacgatctagaattgaca
gttcgctcggcgaattgtctgaaagcagaaaacatttactacattggtgacttgatccaa
cgtagcgaaaacgaactgcttaagactccaaacttgggtcgtaagtctttgaatgaaatc
aaagaagtattggcttcccgtggtttgtctttaggtatgaagttggaaaactggccacct
gcaggcttagaaaagtaa
DBGET
integrated database retrieval system
