KEGG   Undibacterium parvum: EJN92_06750
Entry
EJN92_06750       CDS       T05754                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
upv  Undibacterium parvum
Pathway
upv00521  Streptomycin biosynthesis
upv00523  Polyketide sugar unit biosynthesis
upv00525  Acarbose and validamycin biosynthesis
upv00541  Biosynthesis of various nucleotide sugars
upv01100  Metabolic pathways
upv01110  Biosynthesis of secondary metabolites
upv01250  Biosynthesis of nucleotide sugars
Module
upv_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:upv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    EJN92_06750 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    EJN92_06750 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    EJN92_06750 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    EJN92_06750 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    EJN92_06750 (rfbB)
Enzymes [BR:upv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     EJN92_06750 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 adh_short KR
Other DBs
NCBI-ProteinID: AZP11720
UniProt: A0A3S9HHY6
LinkDB
Position
1565573..1566640
AA seq 355 aa
MLLVTGGAGFIGANFVLDWVAQSDEAIINLDALTYAGNRENLASLEGNEQHNFVHGDIAD
TALVSALLAQHQPRAIINFAAESHVDRSIHGPEDFIQTNIVGTFKLLEATRAYWGSLKGD
AKRNFRFLHVSTDEVYGSLSKDEPAFTETHQYQPNSPYSASKAASDHLVRAYHHTYGMPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVKDHCSAIRRVLAA
GTVGEVYNVGGWNEKPNLEIVHTVCCILDELRGRADGKSYAEQISYVTDRPGHDRRYAID
ASKLERELGWKPAETFETGIRKTVLWYLENQAWVANVLSGNYRDWVAKNYAERQA
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgcttttagtcacaggaggcgcgggatttattggtgcaaactttgtactcgactgggta
gcgcaatctgacgaagctatcatcaatcttgatgccttgacttacgctggcaatcgcgaa
aaccttgcctccttagaaggcaatgagcagcataattttgtgcatggcgatatcgctgat
actgcgttagtgagcgccttactggcacaacaccaaccacgcgccatcattaatttcgcc
gcagaaagccatgtggaccgatccatccatggcccggaagatttcatccagaccaatatc
gttggcacctttaaattactcgaagccacgcgcgcctattggggtagtttgaaaggcgat
gctaagagaaatttccgtttcctgcatgtctcgaccgatgaagtgtatggatcgctgagc
aaggatgagccagcctttaccgaaacccatcagtaccagccaaatagcccttattcagcc
agcaaggcggccagcgatcatctggtgcgcgcttaccaccacacctatggcatgccggta
ctgaccactaattgctcaaataattacggcccctatcatttcccggaaaaactcatccct
ttgatgatcgttaatgccctggcaggcaaagccttaccagtctatggtgacgggcagcaa
atccgcgactggctgtatgtcaaagaccattgcagcgcgatacgcagagtactagccgca
ggcacggtaggtgaggtgtataacgtcggcggctggaacgaaaaaccaaatctggaaatc
gtccacactgtatgctgcatactcgatgaattgcgcggccgagccgatggcaaaagctat
gcagaacagattagttacgtaactgataggccaggccacgaccgccgttatgcgattgac
gccagcaaactggaacgcgaactaggctggaaaccggcagaaacctttgagactggcata
cgcaagacagtcttatggtatctggaaaatcaagcctgggtagccaatgttttatccggc
aattaccgcgactgggtcgccaaaaattacgcggaacgccaggcatga

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