Undibacterium parvum: EJN92_06750
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Entry
EJN92_06750 CDS
T05754
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
upv
Undibacterium parvum
Pathway
upv00521
Streptomycin biosynthesis
upv00523
Polyketide sugar unit biosynthesis
upv00525
Acarbose and validamycin biosynthesis
upv00541
Biosynthesis of various nucleotide sugars
upv01100
Metabolic pathways
upv01110
Biosynthesis of secondary metabolites
upv01250
Biosynthesis of nucleotide sugars
Module
upv_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EJN92_06750 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EJN92_06750 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EJN92_06750 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EJN92_06750 (rfbB)
00525 Acarbose and validamycin biosynthesis
EJN92_06750 (rfbB)
Enzymes [BR:
upv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EJN92_06750 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AZP11720
UniProt:
A0A3S9HHY6
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Position
1565573..1566640
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AA seq
355 aa
AA seq
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MLLVTGGAGFIGANFVLDWVAQSDEAIINLDALTYAGNRENLASLEGNEQHNFVHGDIAD
TALVSALLAQHQPRAIINFAAESHVDRSIHGPEDFIQTNIVGTFKLLEATRAYWGSLKGD
AKRNFRFLHVSTDEVYGSLSKDEPAFTETHQYQPNSPYSASKAASDHLVRAYHHTYGMPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVKDHCSAIRRVLAA
GTVGEVYNVGGWNEKPNLEIVHTVCCILDELRGRADGKSYAEQISYVTDRPGHDRRYAID
ASKLERELGWKPAETFETGIRKTVLWYLENQAWVANVLSGNYRDWVAKNYAERQA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcttttagtcacaggaggcgcgggatttattggtgcaaactttgtactcgactgggta
gcgcaatctgacgaagctatcatcaatcttgatgccttgacttacgctggcaatcgcgaa
aaccttgcctccttagaaggcaatgagcagcataattttgtgcatggcgatatcgctgat
actgcgttagtgagcgccttactggcacaacaccaaccacgcgccatcattaatttcgcc
gcagaaagccatgtggaccgatccatccatggcccggaagatttcatccagaccaatatc
gttggcacctttaaattactcgaagccacgcgcgcctattggggtagtttgaaaggcgat
gctaagagaaatttccgtttcctgcatgtctcgaccgatgaagtgtatggatcgctgagc
aaggatgagccagcctttaccgaaacccatcagtaccagccaaatagcccttattcagcc
agcaaggcggccagcgatcatctggtgcgcgcttaccaccacacctatggcatgccggta
ctgaccactaattgctcaaataattacggcccctatcatttcccggaaaaactcatccct
ttgatgatcgttaatgccctggcaggcaaagccttaccagtctatggtgacgggcagcaa
atccgcgactggctgtatgtcaaagaccattgcagcgcgatacgcagagtactagccgca
ggcacggtaggtgaggtgtataacgtcggcggctggaacgaaaaaccaaatctggaaatc
gtccacactgtatgctgcatactcgatgaattgcgcggccgagccgatggcaaaagctat
gcagaacagattagttacgtaactgataggccaggccacgaccgccgttatgcgattgac
gccagcaaactggaacgcgaactaggctggaaaccggcagaaacctttgagactggcata
cgcaagacagtcttatggtatctggaaaatcaagcctgggtagccaatgttttatccggc
aattaccgcgactgggtcgccaaaaattacgcggaacgccaggcatga
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