Neoundibacterium parvum: EJN92_06880
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Entry
EJN92_06880 CDS
T05754
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
upv
Neoundibacterium parvum
Pathway
upv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EJN92_06880 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upv03400
]
EJN92_06880 (xth)
Enzymes [BR:
upv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EJN92_06880 (xth)
DNA repair and recombination proteins [BR:
upv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EJN92_06880 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF5648
Motif
Other DBs
NCBI-ProteinID:
AZP11742
UniProt:
A0A3Q9BPY2
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All DBs
Position
1596150..1596923
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AA seq
257 aa
AA seq
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MTKIISANLNGIRSAAKKGFFEWFEKEAADFVCVQELKAQAADMTPDFLTPHGYHGHFHY
AEKKGYSGAGVYSRSKPDAVHIGFGSPEFDAEGRYVRCDFGNLSVISVYCPSGSSSPERQ
EAKFRFMELFMPHLAGLIAEGRELVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWMT
SLFDDVGWVDVYRQLHPETTGDAYTWWSNRGQAWANNVGWRIDYHVATKGIAGTAQSASI
YKEQRFSDHAPLIINYA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatcatctccgccaatcttaatggcatacgttccgcggctaaaaaaggtttt
tttgaatggtttgagaaggaagcggctgactttgtttgtgtgcaggagttgaaggcacag
gcggcggatatgacgcctgattttttgacaccgcatggctatcatgggcattttcattat
gccgagaagaagggttactcgggtgctggtgtgtatagccgcagtaaaccggatgccgtg
catatcggttttggtagccctgagtttgatgctgaggggcgctatgtgcgctgcgatttt
ggtaatttgtcggtgatctcggtgtattgcccttccggctcttcttcgccggagcggcaa
gaggcgaagttccgttttatggaattgttcatgccacatctggcgggcttgattgccgag
gggcgcgagctggtgatttgtggcgactggaatatcgcgcacaaagaaatcgatctcaag
aactggaagagtaatcagaaaaactctggcttcttgccggaagaacgcgcctggatgacg
tccttgtttgatgatgtcggttgggtcgatgtgtatcgccagctgcatccggaaactact
ggtgacgcgtatacctggtggagcaatcgcggccaggcatgggcgaataatgtcggttgg
cgcatcgattatcatgtcgccactaaaggcatcgctggcaccgcgcaatctgcctctatc
tacaaagaacagcgttttagcgatcatgcacccttgattattaattacgcgtaa
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