KEGG   Neoundibacterium parvum: EJN92_13020
Entry
EJN92_13020       CDS       T05754                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
upv  Neoundibacterium parvum
Pathway
upv02020  Two-component system
Brite
KEGG Orthology (KO) [BR:upv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EJN92_13020
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:upv02022]
    EJN92_13020
Two-component system [BR:upv02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   EJN92_13020
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 HTH_8 AAA_16 HTH_50 AAA_2 AAA Torsin HTH_30 TadZ_N bpMoxR FleQ AAA_14 ResIII RsmI_C AAA_7 AAA_3
Other DBs
NCBI-ProteinID: AZP12844
UniProt: A0A3Q9BRN5
LinkDB
Position
2974324..2975700
AA seq 458 aa
MRKPMSSLSAVLIEDEQAVRLATTQALELGGFTVQAFASAEQAQASLHAGFAGIIVTDVR
LPGLSGLELLAQVMLIDSDLPVLVITGHGDVSMAVAAMRAGAYDFIEKPYASERLLASCL
RAQEKRRLILENRQLKQSLTVHAGMPELIGQTPAIEKIRQFIRNIGPSQADVLIHGATGT
GKEVVARQLHLASGRKGEFVAINCGALPESMFESEIFGHEAGAFTSAQKRRIGKLEYANG
GTVFLDEIESMPLALQVKLLRVLQERRLERLGGNSLIALDCRIIAASKSDLLSLSAEGKF
REDLYYRLAVVSLQLPSLKQRSTDIPLLLAAFVHASAHRYQKEIPEWSALQMQTWQQREW
PGNVRELRNFADQLVLGVSESEAMSRQFARFPVLALARDDEDSLPKRLDNYEATLIAYAL
NSHQSNVALTAESLGIPKKTLYDKLKKYQLLNGKLTEE
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgagaaaacctatgtctagtttgagcgcggtattaattgaagatgagcaggcggtgcgt
ctggcgaccacgcaggcgctggagctgggcggctttacggtgcaggcctttgccagcgcc
gagcaggcgcaagcctctttgcatgccggctttgctggcatcatcgtcaccgatgtgcgc
ctgcctggcctgtccggcttagagttgctggcgcaggtgatgctgatcgatagcgacttg
ccggtgctggtgattaccggccatggcgacgtcagtatggcggtggcagcgatgcgtgcc
ggggcctatgattttatagaaaaaccgtatgccagcgagcgcctgcttgccagctgcttg
cgggcgcaggaaaaacgtaggctgatactggaaaaccgtcagcttaaacaaagtctgact
gtgcatgctggtatgcctgagctgatagggcaaaccccggcaattgagaaaatccgtcaa
ttcatacgcaatattggccctagtcaggccgatgtgctgatccacggtgccaccggtacc
ggcaaagaagtggtggcgcgccaactgcatctggccagtgggcgcaagggcgaattcgtt
gcgattaattgcggtgctttgcctgagtctatgttcgagagtgaaattttcgggcatgag
gccggcgccttcaccagcgcgcaaaaacgccgtatcggtaagcttgagtacgccaatggc
ggcaccgtctttctcgatgaaatagaaagtatgccgctggccttgcaagtaaaattactg
cgggtgttgcaagagcgccgcctcgaaaggctgggcggcaatagcttgatcgcgctagac
tgtcgcatcatcgcggcgagtaaatcggatctgcttagcctgagtgcggaaggtaaattt
agggaagatttgtattatcgtctggccgtggtcagcctgcaattacctagcctgaaacaa
cgcagcaccgatattcccttattgctggcggctttcgtgcatgcctcagcgcatcgctat
caaaaagaaatcccggaatggagtgcgctacagatgcagacttggcagcagcgtgaatgg
ccgggcaatgtgcgtgaactacgtaatttcgccgatcagttagtgctgggggtgagcgaa
tcggaggccatgagccggcagtttgctcgattcccggtgttagctttggcgcgcgatgat
gaggatagcttaccgaaacgcctggataattacgaagcgaccctgatcgcctacgcttta
aatagccatcaatcgaatgtcgccctgaccgccgagagtctgggcatacccaaaaaaact
ttgtacgataagctaaaaaaatatcaactattgaatggcaaactgactgaggaatag

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