Undibacterium parvum: EJN92_13120
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Entry
EJN92_13120 CDS
T05754
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
upv
Undibacterium parvum
Pathway
upv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EJN92_13120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
upv02022
]
EJN92_13120
02035 Bacterial motility proteins [BR:
upv02035
]
EJN92_13120
Two-component system [BR:
upv02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
EJN92_13120
Bacterial motility proteins [BR:
upv02035
]
Pilus system
Twitching motility proteins
EJN92_13120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_28
AAA_16
AAA_19
FleQ
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AZP14556
UniProt:
A0A3Q9BU85
LinkDB
All DBs
Position
3000333..3001811
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AA seq
492 aa
AA seq
DB search
MRVLVVDDEAHLRELLEITLIKMGLDVDSAESLAVARSYLAKTSYALVLTDMRLPDGSGM
ELVEEVGSLYKNTPIAVITAFGSADNAVVALKAGAFDYVSKPVALDQLRKLVRSALQMNQ
VPVAISKEAQAPDALSPSCLIGQSAAMQDVRSQIARLARSMAPVIITGESGSGKELAARE
IHANSVRLGKAFIAVNCGAIPEALMEAEFFGYRKGAFTGASDDRDGFFQAASGGTLMLDE
VADLPLAMQVKLLRAIQERRVRKVGATVEEPVDVRIISATHQNLEACVSAGKFRQDLYYR
LNVIELHLPPLRERLGDIAVLSDAILQRLGSTEYPVSLQASALQALSEYDFPGNVRELEN
ILERAVAFANDGSIEVTDLALRNNGRNSGSSKTARLNETAKLEASEVADFTQILAQPPPL
MADLVALEEENLFSAPELPCCLPEYLEKIERELIRRALLKTHDNRTQAAELLGVSFRQLR
YQIQKLKINDAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttagtcgtggacgacgaagcgcatttgcgtgaattattagaaatcaccctg
atcaaaatgggcttggacgtcgacagtgccgagtccttggcggtggcgcgtagctatttg
gcgaagaccagctacgccctggtattgaccgatatgcgtttgccggatggctccggtatg
gagttggtagaagaagtcggtagcctgtataaaaacacgcctatcgccgtgattaccgcc
ttcggcagtgccgacaatgcggtggtggcgcttaaagctggtgcttttgattatgtctcc
aagcccgtcgccttagaccaattgcgtaaattagtccgctccgcgctgcagatgaatcag
gtgccagtcgcaatttctaaagaagcgcaagcccctgatgcactgagcccgtcttgcctg
atagggcagtcggcagccatgcaggatgtgcgctcccagatcgcgcgtttggcgcgcagc
atggcgccggtgatcattaccggcgaatccggtagcggtaaagaattggcggcgcgtgag
attcatgccaatagcgtacgtctgggcaaggcgtttatcgcagtcaattgcggcgcgatc
cccgaggccttgatggaggccgaattttttggttatcgtaaaggtgctttcaccggggcg
agcgacgatagagatggtttttttcaggcggccagtggcggtactttaatgctcgatgaa
gtcgctgatttgcccttggcgatgcaagtgaagttactgcgcgcgatacaagagcggcgc
gtacgcaaagtgggcgcgaccgtcgaagagccggtcgatgtgcgcatcattagcgccacc
catcaaaatctggaagcctgcgtcagcgccggtaaattccgccaggatttgtattaccgc
ttaaacgtcatcgaattgcatctgccacctctgcgtgaacgcttgggggatatcgcggta
ttgtccgatgcgatactgcagcgtttaggcagtaccgagtatccggtcagtttgcaagcc
tcggccttacaagctttgagtgaatacgattttcccggcaatgtgcgtgaactagagaat
atccttgagcgcgcggtggccttcgccaacgatggcagtatagaagtgactgatctggcc
ttacgcaataatggccgcaatagtggcagcagtaaaaccgcccggctcaacgagactgcg
aagcttgaggctagcgaagtagcagatttcacccagatattggcgcagcctccacctttg
atggcggacctggtcgcgcttgaagaagagaatctattttcggcaccggaactgccttgt
tgtctgcctgagtatctagagaaaatagagcgcgaactgatacgccgcgctttgctcaaa
acccatgacaaccgcactcaggcggccgagttgctgggggtgagtttccgtcaattgcgt
tatcaaattcaaaaattgaaaatcaatgatgctggctaa
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