Undibacterium parvum: EJN92_13920
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Entry
EJN92_13920 CDS
T05754
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
upv
Undibacterium parvum
Pathway
upv00550
Peptidoglycan biosynthesis
upv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EJN92_13920 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
upv01002
]
EJN92_13920 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
upv01011
]
EJN92_13920 (dacB)
Enzymes [BR:
upv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EJN92_13920 (dacB)
Peptidases and inhibitors [BR:
upv01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
EJN92_13920 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
upv01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
EJN92_13920 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AZP13001
UniProt:
A0A3S9HLN8
LinkDB
All DBs
Position
complement(3182497..3183930)
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AA seq
477 aa
AA seq
DB search
MLKLPSLLLPFFFFCLPGYAQTELPPSVDAALKKANIAPSNLSLMVLPAVGGSAILSQYA
ERSMNPASTMKLLTTQVALEELGPNFRWKTQFLSDIPVKQEILSGKLYLRGGGDPNLTWD
KLAIMLRKLRQQGLRKIEGDIVLDRSYLQPTRPDLNAPLFDEAPDAYYNVVPDALLVHSN
IIAFALEADASKLSVRLMTPLDKITINNRLQLNNKPCADWEKTWLPPTIESGQAQQIEIT
LNGSFPRRCEKTTYLNLLDRNLYIAHMLRLLWQEMGGSWQGEVVDGITPANAILLGERLS
DSLADTLRIINKYSDNSMARLLYLTLGAESVAAKTYPDHLQAAQARIRSWLVLQGINEQG
LVLENGSGLSRIERISAAQLAGVLQAAARSNWYPEFASSLPIVALDGTMRKRLKNGLNGG
NARIKTGSIKDAISIAGYVRDIHGANWILVGIINGENAGKGRPALDELIAWVAAGQP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacttccctccctgctgctgcccttcttctttttttgtttgcctggctacgca
caaaccgagctgccacctagtgtcgatgcggccttaaaaaaagccaacatcgcccctagc
aatctcagtctgatggtgctgcccgcggtcggtggtagcgcaatattgagccagtatgcc
gaacgctcgatgaatccggcgtccactatgaaactattgacgacacaggtggcgctggaa
gagttggggccaaatttccgttggaagactcagttcctcagtgatattccggtcaagcaa
gaaatcttatccggcaagctgtatctccgtggtggtggcgacccgaatctgacctgggat
aaactggccatcatgctgcgcaaactacgtcagcaaggcctgcgaaaaatcgagggcgac
atcgtactagaccgcagttatttgcagcccacccggcccgacctgaatgccccgttgttt
gacgaagccccggatgcctattacaacgtagtgccagacgccctgctggtccatagcaat
atcatcgcattcgcattggaagcagatgccagcaaactgagcgtacgcttgatgacaccg
ctggataaaataacgatcaataaccgcctgcaactcaataacaagccctgcgccgattgg
gaaaaaacctggttgccgccgactatagaaagcggccaggcacagcaaatcgaaatcaca
ctaaatggtagttttccacgccgctgcgagaaaaccacctatctaaatctcctagatcgc
aatctctacatcgcccacatgctgcgtttattgtggcaggaaatgggtggcagttggcag
ggtgaggtagtcgatggcatcacccctgccaacgctattttgctgggcgaacgactatcc
gactcactggcggacacactacgcatcatcaataagtattcagataacagcatggcgcgt
ttattgtatttgacgctgggcgctgaatcggtggcggcaaaaacctatcccgatcatctg
caagcggcacaagcgcggatacgtagctggctagttttacaggggattaatgagcaaggg
ctggtcttggaaaatggctcgggtttatcacgcatagagcgcatcagtgccgcgcaactg
gctggcgtgttacaagctgcagcgcgtagcaattggtatccggaatttgccagcagcttg
cctatcgtggcgctcgacggcaccatgcgcaaacgtctaaagaacggtttaaacggtggc
aacgccagaattaaaaccggcagcatcaaggatgccatttctatcgctggctatgtgcgt
gacatccatggcgccaattggatcctggtcggcatcatcaacggcgagaatgccggcaag
ggtaggccagccttagatgaactgatcgcctgggtcgccgcaggccaaccttaa
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