KEGG   Undibacterium parvum: EJN92_16340
Entry
EJN92_16340       CDS       T05754                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
upv  Undibacterium parvum
Brite
KEGG Orthology (KO) [BR:upv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:upv03032]
    EJN92_16340
   03036 Chromosome and associated proteins [BR:upv03036]
    EJN92_16340
   03400 DNA repair and recombination proteins [BR:upv03400]
    EJN92_16340
DNA replication proteins [BR:upv03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EJN92_16340
Chromosome and associated proteins [BR:upv03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EJN92_16340
DNA repair and recombination proteins [BR:upv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EJN92_16340
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 Phage_cement_2
Other DBs
NCBI-ProteinID: AZP13418
UniProt: A0A3S9HMV1
LinkDB
Position
3740843..3741115
AA seq 90 aa
MNKTELIDHIAKTADISKAASARALDALIGAVKVTLKKGNTVTLVGFGTFSVGKRAARTG
RNPRTGEAIKIKAAKVPKFKPGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaaacagaattaatcgatcatattgcgaaaacagccgacatttctaaggctgcg
tcagcgcgcgctttggatgctttgatcggtgcagtaaaagtaactttgaaaaaaggtaac
acggtaactctggttggattcgggaccttctccgtcggcaagcgtgccgctagaactggt
cgtaatccacgtaccggtgaagcaattaaaatcaaagcagccaaggttcctaaatttaaa
cctggcaaagctttgaaagatgctgtaaactaa

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