Undibacterium parvum: EJN92_16340
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Entry
EJN92_16340 CDS
T05754
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
upv
Undibacterium parvum
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
upv03032
]
EJN92_16340
03036 Chromosome and associated proteins [BR:
upv03036
]
EJN92_16340
03400 DNA repair and recombination proteins [BR:
upv03400
]
EJN92_16340
DNA replication proteins [BR:
upv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EJN92_16340
Chromosome and associated proteins [BR:
upv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EJN92_16340
DNA repair and recombination proteins [BR:
upv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EJN92_16340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Phage_cement_2
Motif
Other DBs
NCBI-ProteinID:
AZP13418
UniProt:
A0A3S9HMV1
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All DBs
Position
3740843..3741115
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AA seq
90 aa
AA seq
DB search
MNKTELIDHIAKTADISKAASARALDALIGAVKVTLKKGNTVTLVGFGTFSVGKRAARTG
RNPRTGEAIKIKAAKVPKFKPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaacagaattaatcgatcatattgcgaaaacagccgacatttctaaggctgcg
tcagcgcgcgctttggatgctttgatcggtgcagtaaaagtaactttgaaaaaaggtaac
acggtaactctggttggattcgggaccttctccgtcggcaagcgtgccgctagaactggt
cgtaatccacgtaccggtgaagcaattaaaatcaaagcagccaaggttcctaaatttaaa
cctggcaaagctttgaaagatgctgtaaactaa
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