Undibacterium parvum: EJN92_16525
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Entry
EJN92_16525 CDS
T05754
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
upv
Undibacterium parvum
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
upv03019
]
EJN92_16525
03016 Transfer RNA biogenesis [BR:
upv03016
]
EJN92_16525
Enzymes [BR:
upv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
EJN92_16525
Messenger RNA biogenesis [BR:
upv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EJN92_16525
Transfer RNA biogenesis [BR:
upv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EJN92_16525
Prokaryotic type
EJN92_16525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
AZP14633
UniProt:
A0A3Q9BUC7
LinkDB
All DBs
Position
3777696..3778061
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AA seq
121 aa
AA seq
DB search
MVLRKWTAFLLLLLFSAAVFSKQLLSFDAISVHDLPPEARTTLMLIKSDGPFPYSQDGKV
FGNYESNLPKQKRGYYHEYTVKTPRAKNRGARRIIAGGNAKFDSEYYYTDDHYESFRKIY
E
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggttttaagaaaatggactgcatttttattgttgttactgttttcggcagcggttttt
tctaaacagttacttagttttgatgctatctctgttcatgatttgccaccggaggcacga
acaacgctaatgctgataaaaagcgatggcccgtttccttattcacaagacggaaaagtt
ttcggaaattatgagtcaaatctgcccaagcagaagcgtggttattatcatgaatatacc
gtcaaaacaccgcgggcgaaaaatcgaggtgcacggcgcattattgctggcgggaacgca
aaattcgatagtgaatattattacacggatgatcactatgagagttttcgaaaaatatat
gagtaa
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