Undibacterium parvum: EJN92_19335
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Entry
EJN92_19335 CDS
T05754
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
upv
Undibacterium parvum
Pathway
upv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EJN92_19335 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upv03400
]
EJN92_19335 (recC)
Enzymes [BR:
upv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EJN92_19335 (recC)
DNA repair and recombination proteins [BR:
upv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJN92_19335 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AZP13957
UniProt:
A0A3S5HM47
LinkDB
All DBs
Position
complement(4428529..4432017)
Genome browser
AA seq
1162 aa
AA seq
DB search
MSVPISTITPGLIILHGNQLEQLRAAVFAWLRLHPLAPLEQALFLVQSNGIAEWLKIAVA
EELGVCAATRIDLPGRFLWGVYRAMLGRDQVPSRSALDKAPLTWRLMRLIPELLEQDDFL
PLRHFLADGNPERRLQLAERLADLLDQYQVYRADWLNDWAEGRDVLRNASGEVKALLPDQ
RWQAQLWRAILTDVVNNSDDAADALGRVTVHQRFLEQVASGQLPVSKLPRRVVLFGISAM
PQQTLEALAALAKHTQVILAVPNPCQFYWGDIIEGRELLKAQHKRQQARKGLDLSTIPLD
QLHAYSHPLLAGWGRMGRDFVRLLDEFDNAKATQENFSSLRIDLFTEEQGSTLLAGLQAS
VRDMLPLNEHPHPGFNADDRSIVFHVAHSTQREVEILHDQLLSMLAEQKTALRPRDIVVM
VPDIEVFSAAIRAVFGQYPQRDARHIPYTIADVKDRSVNPLLLALDYLLRLPQQRCRQSE
VRDLLDVAALATRFGVRPEDLPQLSLWIAGAEIRWGLDQSHREGLGLGATGEQNAWIFGI
RRMLLGYASGNAESYAGIQPYAEIGGLDASLAGSLAQFIESLIHWRAVLAQSATPELWGQ
RARALLRAFFVTEGSQLAEADRLTLGQLEDTLQQWLEACRSAGFEESISLSVMREAWLSA
LDQPSVDHQFVSGGVTFCTLMPMRAVPFKVVCLLGMNDGDYPRRSQHLDFDLLAQAGMAR
PGDRSRRHDDRYLMLEALLAARDTLYISWVGKNIRDNSEQPASVLVAQLRDYLKAAWDCE
LEQMTTQHALQAFSRRYFEQAGLTTYAREWRNAHHEITLGQPIAPDATLSGETLAAFEVD
KGYRLKLSELARFIKQPAKYFFRQRLGVMFNDEQTLGEDEEPFGLNALEEYARADSLLDD
LGKPEAIAEVADTLSKRAAKLGREGVLPVGLIGSQWQNQLVNALTPVRTAWLELCQQYPY
PAEKVAINLIIDEIQLDGWLERMHSSTAGQNGEVVSLTQISSKITNKKGELRGEKLIDAW
LSQLAAAALGRPVMGFLLARDAIISMQPLAQAEAIETLHTLLACWRAGMDRPLPSACKTG
LALAQAGNPQQVYEGGYQLRGEVEEASLARLWPDYAALSSEPDYESCSLTLYGALAAWMQ
SALGITAIDAYLSTSNDDQDAA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcccaatttctactatcacgcctggtctgattattctgcatggcaatcagctc
gaacaattgcgtgccgcggtgtttgcctggttgcggcttcatccactggcgccattggag
caggcgctatttttggtgcaatcgaacgggattgccgagtggctgaaaatcgccgtggcg
gaagaattgggcgtctgcgctgccacccgcatcgatttgccagggagatttttgtggggc
gtgtatcgagctatgttagggcgcgatcaggtgcccagccgatccgccttagataaagca
ccgctgacctggcgtttgatgcgcctgattcctgagttgctggagcaagatgatttttta
ccgctcaggcactttctagctgacggcaatcccgagcgtcgcctgcaattggccgaacgt
ctggccgatttactcgatcaatatcaggtgtaccgcgccgattggctcaatgactgggcc
gaggggcgcgatgttttgcgcaacgccagtggagaggtaaaagctttattgcctgatcag
cgctggcaggcgcaactgtggcgtgccattctgactgacgttgtcaacaatagcgacgat
gcagccgatgctctgggacgggtgacggtacaccagcgttttcttgagcaagtggcaagc
ggccaactgcccgtcagcaagctaccacggcgggtggtgttatttgggatttcggcgatg
ccgcagcaaactctggaggcgctagcagccttggcaaagcatactcaggtgatcttggca
gtacccaatccttgccagttttattggggcgacatcatagaaggacgcgaactgctcaag
gcccagcacaagcgccagcaagcacgcaaaggcttggacctatcaacgatccccttagat
cagttgcatgcatacagccatcctctgctggcgggatggggccgcatggggcgcgatttt
gtgcgcttgctggatgaattcgacaatgccaaggccacccaagaaaatttcagcagcttg
cgcattgatctgtttaccgaagagcaaggctctactttattagccggcttgcaggcctcg
gtgcgcgatatgctgccgctcaacgagcaccctcaccccggctttaatgccgacgatagg
tctatcgttttccatgttgcgcacagcacgcagcgcgaggtcgaaattttgcatgatcaa
ttattgagcatgctagccgaacaaaaaacagccctgagaccgagggacatcgtggtgatg
gtgcccgatatcgaggtattctcagctgccatccgcgccgtgttcgggcaatacccgcaa
cgcgatgcccgtcatatcccctacaccatcgccgacgtcaaagaccgtagcgtcaacccg
ctattgctggcactcgattatttactgcgcttgccgcagcagcgttgccgccagagtgag
gtgcgtgatctattggatgtcgcggcactggcaacccgatttggcgtgaggccagaagac
ttgccgcaactgagcctgtggatcgccggcgccgagatacgctggggcctggatcaaagc
caccgcgaaggcttggggttaggtgccactggcgagcaaaatgcctggatctttggcata
cgccgtatgttgctcggttacgccagtggcaatgcagaaagttacgccgggatacagccc
tacgccgaaatcggcggcctcgatgcctctctagcgggatcgctggcgcagtttatcgag
agtttgatccattggcgggcagtgttggcgcagtccgccactcccgagctctgggggcaa
cgtgcgcgtgcgctgttacgcgctttctttgtgactgaaggtagccaactcgctgaagct
gatcgcctcactttgggccaattagaagacacgctacagcaatggttagaggcatgccgc
agcgctggttttgaggaaagcattagcctgagcgttatgcgcgaagcttggctaagcgcg
ctcgaccagcctagtgtagaccatcagttcgtctccggcggcgtgactttttgcacactc
atgccgatgcgcgcggtgccgtttaaagtggtgtgtttgctaggcatgaatgatggcgat
tatccgcgtcgcagccagcatcttgattttgatttactggcacaagctggcatggcgcgc
ccgggtgaccgttcgcgccgccacgatgacaggtatctgatgctagaggcgctgctagcc
gcacgcgacactctgtatatctcttgggtaggaaaaaatattcgtgacaatagtgaacag
ccggcctcggtgctggtggcgcaattgcgtgattacctcaaggcagcctgggattgcgag
ctcgaacaaatgacgacccagcatgcgctgcaggcatttagccggcgctactttgagcaa
gctggcttgaccacctacgccagagaatggcgcaatgctcatcatgagatcactttaggt
cagcccatcgcgcccgatgccacattgagcggcgagacattagccgcatttgaagtcgat
aaggggtatcgcctcaagctcagtgagttggcgcgctttatcaagcaaccggcgaaatat
tttttccggcagcgactgggggtgatgttcaatgatgagcaaaccctgggcgaggatgaa
gaacctttcggcctgaatgcgctagaagaatatgcgcgtgccgatagtctattagacgac
ttaggcaagccagaagcgatcgccgaagtggccgacacgctcagtaaacgtgccgccaag
ctggggcgcgaaggcgtattgccggtaggactaatcggtagccaatggcaaaaccagttg
gtgaatgcattgacgccagtacgcactgcctggttagagctgtgccagcaatacccttac
ccagccgagaaagttgcgatcaatctgatcatcgatgagatacagttagacggctggctg
gagcgcatgcacagcagtactgctgggcaaaatggcgaagtggtcagcctgacccagatt
tccagcaagatcacgaataaaaaaggcgaattgcgcggcgagaaattgatagacgcctgg
ctcagtcaattggcagcggcagcattaggacgcccggtgatgggtttcttattagcacgc
gatgccatcatcagcatgcaacctttagcccaagctgaagcaatcgagaccctgcacact
ttgctcgcctgctggcgcgctggcatggatagacccttacctagtgcctgtaaaaccggt
ctggctctggcacaggcaggcaatcctcagcaagtgtacgagggtggttatcaactacgc
ggcgaagtcgaagaggccagcttggccagactatggccagactacgcagcgctcagcagc
gagccagattatgagtcttgctcgctgacactatacggtgctttagccgcatggatgcaa
agcgcgctgggcatcaccgcgatagacgcctacctcagtactagcaacgatgaccaggat
gcagcatga
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