Undibacterium parvum: EJN92_20335
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Entry
EJN92_20335 CDS
T05754
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
upv
Undibacterium parvum
Brite
KEGG Orthology (KO) [BR:
upv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upv03400
]
EJN92_20335 (sbcD)
DNA repair and recombination proteins [BR:
upv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJN92_20335 (sbcD)
Archaeal homologous recombinant proteins
EJN92_20335 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AZP14139
UniProt:
A0A3S9HPZ3
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All DBs
Position
4676340..4677578
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AA seq
412 aa
AA seq
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MRFIHTSDWHLGQTLHNFERGFEHQAFLDWLISTLVSEQAEALLISGDIFDTANPSAAAQ
KQFYRFLQQAKSRVPHLNIVIIAGNHDSPGRLEAPGPLLETLDATVIGFVPRLADASIDL
SKLVVPLKNAAGEIQAWCLAIPFLRPGDVPRVEDAFDPYMQGIALLYQQTLQHALSLRQP
GQAIIALGHCHMVGGEISEESERRIVIGGTEALSANMFDANIAYAALGHLHLAQKVGKQA
HLRYCGSPLPMSFAEVDYQHQVLRVDLADEQAAEITPLLVPRAVELLRVPRQPAPLAQVL
VALTALDIAADTPPEQQPYLEVRVRLDAPEPGLRAAIEAALEGKPVRLAKIETSFAAKIS
SNDVPATLDELERLQPDQIFERLCRSKFEGETPAPLTAAFAELMLSDEVGTP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcttcattcacacttctgactggcatctgggccagaccctgcacaattttgagcgc
ggatttgagcatcaagcctttctcgattggctgatcagcacgctggtcagcgaacaagcc
gaagcgctgttgatctcgggcgacatcttcgataccgccaacccgtcggccgccgcgcaa
aaacagttttaccgctttttacagcaagccaaaagccgcgtgccgcatctgaacatcgtc
atcatcgctggcaatcacgattctccaggccggctagaagcccccggccccttgctagaa
acgctggacgctaccgtgatcggttttgtgccgcgcctggctgacgccagtattgatctg
agcaagctggtggtgccattgaaaaacgcggccggcgaaatccaggcttggtgtctggcg
atccccttcctgcgtccgggtgacgtgccgcgggtggaagacgcgttcgatccgtacatg
caaggcatcgccctgctctaccaacagactctgcaacatgcgctgagcctgcgccagccc
ggccaggccatcatcgcgctcggccattgtcacatggtcggtggcgagatttcagaagaa
tccgaacgccgcatcgtcatcggcggcaccgaggctttgtcggccaatatgtttgacgcc
aacatcgcctacgccgcgcttggtcatctgcatctggcgcaaaaagtcggcaagcaagcg
catctgcgttactgcggcagcccgttgccaatgtcgtttgccgaagtcgattaccaacat
caggtcttgcgcgtcgatctggcagatgaacaagcggccgagatcacgccgttgctggtg
ccgcgtgcggtagagttgttgcgcgtacctagacagcccgcgccgcttgcacaggtcttg
gtagcattaacagcgctagatattgctgccgatacgccgccagaacaacagccatatctc
gaggtcagagtacgtttagatgcgcccgagcccggtctgcgcgccgccatagaagccgcg
ctagaaggcaaaccggtgcggttggccaagatagaaaccagcttcgccgccaaaataagt
agtaacgatgtgccagccacgctcgatgagctagaaagactgcaacccgaccagatcttc
gagcgcctgtgccgcagcaaatttgaaggcgaaacgccagcgccattgaccgccgcgttt
gccgaattaatgctcagcgatgaagtgggcacgccatga
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