Uncinocarpus reesii: UREG_00316
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Entry
UREG_00316 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ure
Uncinocarpus reesii
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ure03009
]
UREG_00316
Enzymes [BR:
ure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UREG_00316
Ribosome biogenesis [BR:
ure03009
]
Eukaryotic type
Pre-60S particles
Helicases
UREG_00316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
8439072
NCBI-ProteinID:
XP_002540803
UniProt:
C4JDF1
LinkDB
All DBs
AA seq
937 aa
AA seq
DB search
MPHRAASPAMSENEFDIAKSLFQDDAESDIDTGPRKRKAPHPLNLNVMADDHDERADSGS
DNDAAFIAAHQASMNRKASNLKGRTVKKGGGFQAMGLNATLLKSITRKGFSVPTPIQRKT
IPLVLDEQDVVGMARTGSGKTAAFVIPMIEKLKSHSSKIGSRALIMSPSRELALQTLKVV
KELGRGTDLKCVLLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMNLDLSSIKYVVF
DEADRLFEMGFAAQLTEILHGLPQSRQTLLFSATLPKSLVEFARAGLQDPTLVRLDTESK
ISPDLQNAFFTVKSAEKEGALLHILHNVIKVPTGETEAGIRAKEQSSSGKHSKKRKRSEQ
NNPSPQESPTEHSTIVFVATKHHVDYIASILRESGFAVAYAYGSLDQTARKIQVNNFRAG
ISNILVVTDVAARGIDIPVLANVINYDFPSQAKIFVHRVGRTARAGRKGWSYSLVRDSDA
PYLLDLQLFLGRRLIMGRNSKEAPNFADDVVVGSIARDGLARHCEWVSKLLDEDIDIQSQ
REVAMKGEKLYMRTRNSASTESAKRSKDVVGSDEWTMLHPLFNDEASQMEVEREKMLARI
GGYKPQETIFEISGRRGGKAGDDEAMDMMRKIRSTVEKRRAKKQNENQATVDADGPTQSF
MLEDEDNEGDDLDDDANGDDVADMSLASDSELEVTFSYPSDKSKAKKGDSGKQPAGSSFQ
NPEYFMSYTPTSHSMAEERAYGVHSGSNSNFVEASRDATMDLSRDEANRGFAEPRSIMRW
DKRHKKYVSRQNDEDGSKGALLVRGESGAKIAASFRSGRFDAWKKSKRLGRMPRVGEAET
PGLSSTVPAGGKRFRHNKQQAPKTADKYRGDYEKKIKKQSELQKQQAEAGMLQFGSKGGT
KKVKSEIRSVDDVRKARVVKEKRREKNARPSKKWKGK
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaccgagcagcctctccagcgatgtcggaaaatgagttcgatattgcaaagagc
ctctttcaagatgatgccgaatccgatattgacaccggaccccggaagcgcaaggcgccg
catccgctcaatctcaatgtcatggccgacgaccacgacgagagagccgatagtggttcc
gacaatgatgctgccttcattgcagcccaccaagcgtcgatgaaccgcaaggcatccaat
ctaaagggccgtacggtgaagaagggcggagggtttcaggcaatgggcctcaatgcaaca
cttctcaaatccattacccgcaaaggcttttcggttccaaccccgattcagcgaaagacg
atcccgcttgtattggatgagcaagatgtcgtgggcatggcacggactggctcagggaaa
actgctgcctttgtgatcccaatgatcgagaagttgaagagccacagttcgaaaatcgga
tcgcgggccttgatcatgtcgccttccagagagctggcattgcaaacactcaaggtggta
aaggaactgggtcgcggaacagatctcaaatgtgtactcttggttggtggtgatagctta
gaggagcaatttggatacatggccgggaacccagatattatcatcgctactcccggccgc
ttcctccatctcaaggttgaaatgaacttagacctgtccagtatcaaatatgttgtgttt
gacgaggccgacagactgtttgagatgggtttcgccgcgcagctcaccgaaattcttcac
ggccttccgcagtctcgccaaacgctactattctccgctacccttccaaagtctttggtt
gaatttgcacgagcaggcttgcaagatcctacacttgtccgcctggatacagaaagtaaa
atatcccctgaccttcagaacgccttttttactgtgaaatcggccgagaaagaaggcgca
cttcttcatatcctccataacgttatcaaagtccctactggtgagacggaagccggtata
cgcgcaaaggaacagtcgagctcggggaagcactcgaagaaaaggaagcgttcagagcag
aataatcccagcccgcaggaatcaccaacagagcactccacgattgttttcgtggccaca
aaacaccacgttgattacatagcttccattcttcgagaatctgggtttgctgtcgcctac
gcatatggatctctcgatcagacagctcgcaaaattcaagtaaacaactttcgagccggc
atctcgaacatcctggtcgttaccgatgtcgctgctcgaggaattgatattcccgtcctc
gccaacgtgatcaattatgattttccttctcaggcaaaaatttttgtccaccgagttgga
cgaactgctcgagcggggcgtaaaggttggagctacagcttagtccgagattcagacgcg
ccctatttactcgacttacaactattccttggccggcgacttattatgggaagaaactca
aaggaagcaccgaattttgcagatgatgttgttgttggaagcattgcccgggacgggctg
gcacggcactgcgaatgggtttccaaattgctagatgaagatatcgatattcaaagccag
cgcgaggttgcgatgaaaggagaaaagctctacatgcgaacccgcaattccgcatctaca
gaaagtgccaaacgatcgaaagatgttgttggttctgacgaatggacaatgctacatcca
ctatttaacgacgaagcgagtcagatggaagtcgaaagagagaaaatgttggcccgtatc
ggaggatataagccgcaagaaacaatttttgaaatcagtggccgacgcggtggaaaggcc
ggcgatgatgaagctatggatatgatgaggaagattcgttcaactgtggaaaaaaggaga
gccaaaaagcaaaatgaaaaccaggccacagttgacgcggatggtccaacccagtctttt
atgctggaagatgaagataacgaaggggatgatcttgacgatgatgccaatggagacgat
gtggctgatatgtccctggcgtctgactctgaactcgaagttacgttttcttacccatcg
gataaatccaaagcaaagaagggagattctggaaaacagccagctggctcttcattccag
aatccagagtacttcatgtcctatacacctacgtctcactctatggctgaagaacgtgcc
tatggggttcattccggttccaatagcaatttcgtggaagcttctagagacgcaacaatg
gatttatcgcgcgatgaagctaatcgcggctttgcggagcctcgttctatcatgcgatgg
gataaacgccacaagaaatacgtctcacgtcaaaatgatgaagacggttccaagggagcg
cttctcgtcaggggcgagagtggagctaagattgcggcaagcttccgtagcggccgcttc
gacgcatggaagaaatcaaagcgtcttggacgcatgccacgggtaggtgaagcagagacc
ccaggtttgtcgtctacggtgccagcaggagggaagcggttcaggcacaataagcaacag
gcccccaagacggctgataagtatagaggtgattacgagaagaaaataaagaagcagagc
gagctgcagaagcaacaagctgaggcaggaatgttgcaatttggatccaaagggggtacc
aagaaggtcaagagcgagatcaggagtgtggatgatgtgaggaaagcaagagtggtgaag
gagaagcggagggagaagaatgccaggccgtcgaaaaagtggaagggaaagtga
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