Uncinocarpus reesii: UREG_01017
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Entry
UREG_01017 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
ure
Uncinocarpus reesii
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_01017
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
UREG_01017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP214
ATG17_like
ANAPC4_WD40
WD40
DUF4407
CC149
CCDC90-like
Motif
Other DBs
NCBI-GeneID:
8438221
NCBI-ProteinID:
XP_002541501
UniProt:
C4JFK3
LinkDB
All DBs
AA seq
1332 aa
AA seq
DB search
MAFSFGGASQPGMGAGKVQLGAELQEIQTQEVGFLSLNGDSKVRLLPSPWPADNLPPPTS
SLLSVASSKSLLAAAGPDGIVIASTDSVRKAFFADATGDSYIRPFQPELQVPLPGRISHV
AFSADETALVVADQNGGGLAVYDVAALMQGKGQPAATISLNGESLRALLPNPVVSELFAA
VTTNGELLIANLKENRLEIGPNGPVLKTGVSSVSWSTRGKQLVAGLADGTAYQMTPKGEG
KADIPRPPDLEGNQHDEMPISSYYILTRHPPDNYEFRRLPEVCSPFGAKRYPPFQFTGRL
KDFEPNLREVLFISSTASTDVGLLTRSTKPLVDDCPPENITDIFTATTMSEDSRRAEVPM
TEDMVDTSPVGLAVDLSSKSNVSSPIPGDDLRESSTPLPALMILNNDGVLSSWWFVYSES
IRQQKPYPGLSAAAKTQPTSQQPAAPQPSTVPETPKPSFGGGLLRQPAFGQPSFGTPATP
TFGSSTPLGANLQQTLGSSQPAFGQSSQLGSGRSLFGQTPVQAPSQFPTGGGFGSFASPG
GFGGTIGPQTPEKSVFAKATSDNSFLNAGQPAFGAQMSFTPKETPGPASGAFGSGGFVLG
STFTPDANAAMDEDKPEKSNGALSFGSFQKSLDLHGDAESSIKPESKRSPFSSAFSNIPE
TETPVSKESAFSTPKTGLFGTPPQFSTLRASVEPTTPSTPSIQPPSVAVSKESIAPSTTP
EDSDSSKTTVKVAAAADSEPTTPPKFTEPPLPPDPTSRAAYGPGDTSASSSNDSRTSAEE
APLPPDFLPVMKKQEPLPEAELSEEPSSPKESVLPGSPKRTPPALPDESEEEKEKAEDFE
DSGEEVTPAVSPIDFKVSPESSFGGVSDKSPTGGLFTKITAPEPKHAVSKPLFGEILETP
VFPPPKLPKGRAVLSPRSPSPVRHQHGTMFSAPDYMRSTSAPIPGNALSRRKAALESSML
ANQVTMASEDIEDEIPPKDFQLQTQRLQIETQELVEDEDEQLRGDLARPLSPAPTLDPFL
PHQDYTGESLKPGIPGQIERLYRDINAMIDEKLLLSEMEKLQRGVEALDQFLQEGKIENI
QEKLEKCHQLFSKDLNNLRGQCASMRKTLDSYTDAAAIASAPLTAEQSALQQDLRKLSTE
FQAKLADLEKDVSLLRAKLADCSKSIGGSGGSSKKSNQHTAKPTVEAVTSTIKTMTNMAQ
QKSGDIDVLEAQMRKLGIDISASVAPQSRETSPFSTPLKKIQRLPITPGSRASGDGGVHS
LYHTPESNRTSKFRSSVLVQSALRSPKGVTELVLPGDSERLKAKAQRRREVVGHLKAALS
HRRSKVRGLDDF
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctcattcggcggcgcctcccagccgggtatgggcgctggaaaggtgcagctg
ggcgctgagctacaggaaattcaaactcaggaagtgggtttcctttctcttaatggcgac
tccaaagtacgcctgcttccttcaccgtggcccgccgacaatctaccccctccgacttcg
tcattgctgagtgtcgcatcgtccaagtcccttttagcagcagccgggccggatggcatc
gtaatcgccagtacggactctgttcgaaaggcgtttttcgcagacgccactggtgatagc
tatattagaccctttcagccagagttacaagtcccactcccaggtagaatctcccacgtg
gcgttctccgctgacgagacggcgctggtggttgctgatcaaaatggcggtggtctcgcg
gtgtacgacgtggcggcactcatgcaaggcaaaggtcagccggcggcaacaataagtttg
aacggggaatcattacgagctttattgccaaaccccgtcgtatccgaactttttgcggct
gtgaccacgaacggggaattattgattgcaaacttaaaagaaaaccggctggaaattgga
cctaatggacccgtcttgaaaactggagttagctcggtttcctggagtacgcgaggcaaa
cagctggttgccggtttggcagatggaactgcctatcaaatgacgccgaaaggagaagga
aaggctgatatcccacgaccgccggatcttgagggcaatcaacacgatgagatgcccatt
tcttcatattacattttgacaagacaccctcccgacaattacgagtttcgaagactgccc
gaagtttgctctccatttggagcgaagcgatacccgcccttccagttcactggtcggcta
aaagacttcgagccaaatttgagagaagttctttttatttcatcgaccgcttcaactgac
gttggacttctcacaagatcaacaaaaccccttgttgatgactgtccgccagaaaatatc
actgatattttcactgctacgacaatgtcggaagactcgagacgagcagaggttccaatg
acggaagatatggttgacacgtcacccgtcggattagctgtggatctctcaagcaagagt
aacgtttcttcacccattcccggtgacgacctcagagaatctagcacaccgttacctgca
cttatgatcttgaataatgacggcgtgctttcttcctggtggttcgtatattcagagtca
atcagacagcaaaagccatatcctggtctttcagcagcagccaaaacccagcctacttcc
caacagccggctgctccacaacctagcactgtaccagaaacgcccaaaccaagttttgga
ggggggctcctgaggcagccagcatttgggcaaccttccttcgggactcctgcaactcct
acatttggctcaagtactccccttggagcaaatcttcaacaaacactaggaagctcccag
cctgcattcggacaatcaagccaactgggaagtgggcgatcactttttggccaaacaccc
gtacaggcgcctagtcaattccctaccggagggggatttggttccttcgcgtctcccggc
ggctttggcggcactattggtccccaaacacccgaaaagagtgtgttcgcaaaagcaacg
agtgataactcgttcttgaatgccggacagcctgcgttcggtgcgcaaatgtcgttcacc
ccgaaagaaactccaggccccgcctccggtgcatttgggtccggtggtttcgtccttggc
tcaaccttcacgccagacgcaaacgctgctatggatgaagacaaaccggagaaatcgaat
ggggccttatcgttcgggtcatttcagaaatcccttgacctccacggtgacgctgaatcc
tcaattaaaccagaatccaaacgatcccccttctcatcggccttttcgaacattcccgaa
actgaaacgcctgtctctaaagaatcagcttttagtactcccaaaacagggctgtttggt
acgcctccacaattctcgacgctccgagcttccgtagagccaacaaccccctctacgcca
tccattcaacctccttcagttgcagtgtcaaaagagagcattgcgccttcaactacgcct
gaggacagcgattcctccaaaacgaccgtcaaagtggcagctgcagcggatagtgaacct
accactccgccaaaattcacagagcccccgcttccgcccgaccctaccagtagagctgca
tatggcccgggggacacttccgcgtcttcgtcaaatgattcacgaacatctgctgaagaa
gctcctttgccaccagatttccttccggtaatgaaaaaacaggagccgctgcctgaagct
gagctttcagaagaacctagttcaccaaaagagtccgtgttaccgggatcacccaaacgt
acgccgccagctctaccagatgaatcagaggaagaaaaggaaaaggccgaagatttcgaa
gatagtggggaagaggtcacaccggcggttagccccattgactttaaagtatctcccgag
agctcctttggaggtgtgtctgataagagtcctactggcgggcttttcacaaagataaca
gcgccggaaccgaaacacgcagtttccaaacctttatttggagaaattctagagacccca
gtatttccaccccccaaattacccaaaggtcgagccgtactcagcccaaggtctccaagc
cccgtccgtcatcagcatggaactatgttctccgcccctgactatatgagatcaacaagt
gcgccaatacctgggaatgctctttcgcgccgaaaagccgccttggaatcttccatgctt
gcaaaccaagtaacaatggcatccgaggacattgaagatgaaatcccacccaaagacttt
caacttcaaacgcaacggcttcaaattgaaacccaggagcttgttgaggatgaggatgag
caactgcgcggagacctggcccgacctctctcgccggccccaacccttgaccctttccta
ccgcatcaagattatactggcgagagtttgaaacctggtattcccggtcaaattgaacgg
ctctaccgcgacatcaatgccatgatagatgaaaaactgctcttgtcagaaatggagaag
cttcagcgaggcgtcgaagcgttggatcagttccttcaagaaggaaagattgaaaatatt
caagagaaactcgaaaaatgtcatcaacttttcagcaaagatcttaataatctcagaggc
caatgtgcaagcatgagaaaaacgttggactcctatactgacgctgcggcaattgcttca
gcaccactgacggcagaacaatcagcgctccaacaagacttacgtaaattatccactgaa
ttccaggcgaaacttgcagatcttgaaaaggatgtgtcgctactgcgggcaaagcttgcc
gactgttctaagtcgataggtggttccggtggctcgtcaaagaaaagcaatcagcataca
gctaaaccaacggttgaagcagtcacatcgactattaagaccatgacgaacatggcacaa
cagaagagcggagatattgatgttttggaagctcaaatgcggaaactaggaattgatatc
tctgcctctgtagctccgcaaagtagggaaacgtctcctttttcgacacctcttaagaag
atacagcgactgcctattactcctggatctcgagcatctggcgatggtggtgttcatagc
ttgtatcatacaccagaatctaataggacctccaaattccggtcaagcgtcctggttcag
agcgcgttacggagtccaaaaggggttacggaattggttttgcctggagattcagaaagg
ttgaaagccaaagctcagcgacggagagaagtggtcggccatctgaaggctgcacttagc
caccggagatcaaaagtacggggcttggatgacttttaa
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