KEGG   Uncinocarpus reesii: UREG_01519
Entry
UREG_01519        CDS       T01132                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ure  Uncinocarpus reesii
Pathway
ure03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UREG_01519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ure03041]
    UREG_01519
Spliceosome [BR:ure03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    UREG_01519
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_SCAP PRP4 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_RIG_2nd Tricorn_2nd WD40_like Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 8440935
NCBI-ProteinID: XP_002542003
UniProt: C4JII2
LinkDB
AA seq 537 aa
MNPARRAYVEDATDDTEMGGVDLANIPMDRDYELPASAAGIAPEKASAILSQFSRKRRAA
AIPVPTDDGRVRVRLRELGHPITLFGEDTTDRRDRLRGLLLELEEQQEAVAAAGEAGVDV
QMQEPEAQEEGEQEHEEEFYTEGTRDLLEARKRITRFSLPRAKARIELQKEESTIPLRTH
IKHRKAIKEKLQSFDLFGSQLAGERPASITRFAPNGESLAVGNWGGGIKLLTVPNLEEKI
TLRGHTDRVGGISWLPGATLASSNISQDSVNLASGGGEGNVHLWSLNQDTPLSTLSGHSG
RVCRVEFHPSGEYLASASFDTTWRLWDVRTSTELLLQEGHSREVFSLAFNPDGSLLASGG
LDSIGRIWDLRTGRTVMILEGHIREIYTLDWGIDSYRVLSGSGDGWVKCWDIRQVRGTGG
VGAHKGVVSDLRWYKGTEATSSYLPTLSQGELNGDVTMSTNPDQVSRHPAQPKKAGTFFV
SGGFDKNVNVFSADDWSLVKSLSGHSGNVLSVDVSDDAKWIASCGHDRTVKLWGIEG
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgaatccggcgcggagagcgtatgttgaggatgcgactgacgacaccgagatggggggc
gtggacctggccaatattcctatggaccgagactacgagctccccgcgtctgctgctgga
atagcgcctgaaaaggcgtctgcgatcctctctcagttctcgcggaaaagaagagcagcc
gcaatccctgtgccgacggatgatggacgagtgcgcgtgcgattacgggagctcgggcat
cctataacccttttcggtgaggatacgacagatcgacgtgatcgattaagagggttgctg
cttgagctcgaggagcaacaggaggctgttgcggctgccggagaagcaggtgtggatgtg
caaatgcaagagcccgaagcgcaagaggagggagagcaggagcatgaagaggaattttac
acagagggcactcgagaccttctcgaagctcggaaaaggattacgcgcttctctctaccg
cgcgcaaaggccagaattgagctccagaaagaagaatcgacaataccactacggacgcat
ataaaacacaggaaagccatcaaggagaaattacaaagctttgatctgtttggctctcag
ctggcgggagaacgcccggctagcattacccggttcgcgcccaatggggaatctctggcc
gttggaaactggggtggaggcatcaagcttcttacagtaccaaatctagaagagaagatc
acgcttcgcggacatacagaccgagttggcggcatctcatggctcccaggcgccactctg
gcttcctcgaacatatcccaagactctgtaaaccttgcatcggggggaggtgagggcaat
gtgcacctgtggtctcttaaccaagatacccccctttctacgttatccggacattccggg
cgtgtgtgccgcgtcgagttccatccctctggggaatacctggcatccgcttccttcgat
accacctggagactctgggacgtgcggactagcactgagttgctattacaagaaggccat
tctcgcgaggtcttttcgctggcatttaaccccgatggatctctccttgccagcggtggg
ctggatagcattggccgcatctgggatttacggacaggccgcacagtaatgatcctggaa
gggcatatccgcgagatatatactttggactggggaatcgactcataccgggtgctttct
ggttccggggatggctgggttaaatgctgggatatccggcaagtccgcgggacaggcggc
gttggtgcccacaagggtgtggtgtccgatctgagatggtataaaggcaccgaagccaca
tcgtcttacttgcccacgctttctcagggagagttgaacggagatgtgacaatgtcgacg
aatcccgaccaggtatcacggcacccggctcaaccaaagaaggccgggacattctttgtg
agcggtggcttcgataaaaatgtcaacgtctttagcgccgatgactggtcattggtgaaa
tcgctaagtggccactctgggaacgtgctcagcgttgacgtgagcgatgatgcaaaatgg
atcgcgagttgtgggcatgatcgcacagttaagctatggggaattgaaggctga

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