KEGG   Uncinocarpus reesii: UREG_01704
Entry
UREG_01704        CDS       T01132                                 
Name
(RefSeq) hypothetical protein
  KO
K11600  exosome complex component RRP41
Organism
ure  Uncinocarpus reesii
Pathway
ure03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UREG_01704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ure03019]
    UREG_01704
Messenger RNA biogenesis [BR:ure03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     UREG_01704
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     UREG_01704
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 8438753
NCBI-ProteinID: XP_002542188
UniProt: C4JJ97
LinkDB
AA seq 270 aa
MPLDTSTTYRLTRLRLDGRRWNELRLIDAQISTNPASSGSSYLATGNTVVVCNVHGPAEG
KRSETTGGSGGAVVSVVVNIAGFAGIDRRKKSMMASGGGGSDSTISIHVSVLSSDGSIFA
ACVNACTLALVDAGIPMPGLLCACTVGMSGRASTPAAELAQSSSRVGGINESLDPLLDMS
HPEEMELPHMTVANTNPVGGGSEADAEEAQMLSIVRMESGVHISYLETMFAVGIDGCKQM
RQILNGVLKRAGKKVLEVEAGHSAGMDIEP
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcctcttgacacctctacaacctaccgcctcactcgcctccgtctcgatgggagaaga
tggaacgaacttcgtctgatagatgcccaaatatccacgaacccagccagctctggatcc
tcttacctggccacggggaacactgttgtggtgtgcaatgtgcacggccctgcggagggg
aagcggtcggaaacaacaggcggaagcggcggagcagtggtttcagtggttgtcaacata
gctgggtttgctggaattgataggaggaagaagagcatgatggctagtggaggtggagga
agtgatagcacgatctcgattcatgtctccgttctttcgtctgatggttcaatttttgcc
gcttgtgtcaacgcttgtactcttgcgcttgtggatgctggcatccccatgcccgggctc
ctgtgcgcctgcaccgtcgggatgagcggacgcgcctcgacgcccgccgcagagctagct
caatcctcgtcacgcgttggcggaataaacgagagcctagatccactgctggatatgtct
catccggaggaaatggaattaccacacatgactgttgcgaatacgaatcccgttgggggt
ggttcagaggccgacgccgaagaagcgcagatgctgtcgatcgtgcggatggagtctggg
gtgcatatatcgtatttagaaacaatgtttgcagtggggattgacgggtgcaagcagatg
agacagatattgaatggggtgctgaaaagagctgggaagaaggtgctagaggttgaggct
ggtcattcggccggcatggatatcgagccctga

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