KEGG   Uncinocarpus reesii: UREG_01851
Entry
UREG_01851        CDS       T01132                                 
Name
(RefSeq) U2 snRNP component prp10
  KO
K12828  splicing factor 3B subunit 1
Organism
ure  Uncinocarpus reesii
Pathway
ure03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UREG_01851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ure03041]
    UREG_01851
   03036 Chromosome and associated proteins [BR:ure03036]
    UREG_01851
Spliceosome [BR:ure03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    UREG_01851
 Complex B
    UREG_01851
 Complex C
   U2 SnRNP specific factors
    UREG_01851
Chromosome and associated proteins [BR:ure03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    UREG_01851
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT HEAT_EZ TOR1L1_N HEAT_EF3_N HEAT_2 Htt_N-HEAT_1 UTP20 XMAP215_CLASP_TOG Adaptin_N UNC45-central mTOR_dom
Other DBs
NCBI-GeneID: 8438488
NCBI-ProteinID: XP_002542335
UniProt: C4JJP4
LinkDB
AA seq 1230 aa
MSDAEFEAIKRLQSERNALAAAKKGSKTFDPSSQRTDFSTKASLTESFDTTLYERNGTDK
YAGYNTSIAVDGDDEDMPDADADQGHRLVGQYTASKDQMSEFASGKGVEEEDILLGREKA
ARISERESDYQKRRFNRGPLTPTRADPFAENINANVGAEGQTYREIMALRELEKEEERVK
KLIADQKVKGEGDFVEHEASLKIDEGDKENQDAGSAMAVSTGRKRKQRWDVASEAPTAIE
STETADAKPKRSRWDQTPAPAAPTEATKRRSRWDQAPSLTAATPVGHQGLATPIHPSQTA
VPMVPVTFGSDISGRNAPLSDEELDMMLPSEGYKILEPPPGYAPIRTPARKMMATPAPVA
NASGIGGFMMQEPENARLMSKQLPTDIPGVGDLQFFKAEDMQYFGKLVDGADENTMSVEE
LKERKIMRLLLKVKNGTPPMRKTALRQLTDNARQFGAGALFNQILPLLMEKTLEDQERHL
LVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDQDYYARVEGREIISNLSKAAGLAHMIS
TMRPDIDHVDEYVRNTTARAFAVVASALGIPALLPFLRAVCRSKKSWQARHTGVKIVQQI
PILMGCAVLPHLQGLVDCIGPNLSDEQAKVRTVTSLAIAALAEAANPYGIESFQDILGPL
WMGARKQRGKGLAGFLKAVGYIIPLMDEEGANYFTSQIMEIILREFSSPDEEMKKVVLKV
VSQCAGTDGVTAAYLKEHVLQDFFKCFWVRRMALDRRNFRQVVETTVDLGQKVGVSEILE
KIVNNLKDESEPYRKMTIETIEKLIASLGAADIGERLEERLIDGVLFAFQEQSVEDIIIL
NGFGTVVNALGTRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCGEDALM
GKLGTFLYEYLGEEYPEVLGSILGALRSIVTVVGINQMQPPIRDLLPRLTPILRNRHEKV
QENTIDLVGRIADRGPESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQ
DVLATLLNNLRVQERQSRVCTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKAM
SFLFEYIGEMAKDYVYAVTPLLEDALIDRDQVHRQTAASVVKHIALGVVGLGCEDAMVHL
LNLLYPNLFETSPHVIDRIIEAIEAIRMAVGSGIVMNYVWAGLFHPARKVRTPYWRLYND
AYVQGADSMIPYYPYLPDEGLARSELAIVL
NT seq 3693 nt   +upstreamnt  +downstreamnt
atgtcagacgccgagtttgaggccatcaaacgccttcagtcagagcgtaatgctctagct
gcggcaaaaaaaggttcaaagacttttgatccatccagccagcgaactgacttttccacc
aaggcttccttgaccgaatccttcgacaccacgctctatgaacggaatgggacagataaa
tatgctggctacaacacttctatcgccgtcgacggtgacgatgaagacatgccagacgct
gatgccgatcaaggccaccggcttgttggacaatacaccgcaagcaaagatcaaatgagc
gagttcgctagcgggaaaggtgttgaagaagaagacatccttctgggtcgcgagaaagct
gctaggatttcagagcgggaatctgactaccagaaacgccgtttcaatcgcggtcctctc
accccgacccgcgccgatccctttgctgagaatatcaacgcaaatgttggggccgaggga
cagacatatcgcgagatcatggcccttcgggaactcgagaaggaagaagagcgtgttaag
aagctcattgcggatcaaaaagtaaaaggagagggtgactttgtcgagcatgaggctagc
ctgaaaatcgatgagggcgataaagaaaaccaagatgcgggctctgctatggcagtttct
accgggaggaagagaaaacagagatgggatgtagcgtcagaagcccccactgcaattgag
agtaccgaaactgctgacgccaagcccaaacgttcaagatgggaccagacgcctgctcct
gcagcgcccacggaggctaccaaacggagatcgaggtgggatcaggctccgtctcttacc
gcggctacaccggtcggacatcaaggacttgcaacacccatacatccctcacaaactgct
gttccaatggtccctgtgacttttgggtcagatatctccggtagaaatgcacctctttcg
gacgaggaattggatatgatgcttccttccgaagggtataaaattctcgaacctccccct
ggatatgcccccatccgaactcccgcgaggaaaatgatggccactccggcccccgtcgcc
aatgcgagtggaatcggtggcttcatgatgcaggagcctgaaaatgctcgtctcatgagc
aaacagttgccaactgacattcctggagttggggatttacaatttttcaaagctgaagat
atgcaatacttcggcaagcttgtagatggagccgatgagaatacaatgtccgtcgaggaa
ctcaaggagcggaaaatcatgagactgctcctgaaagtcaagaacggcaccccgccaatg
cgaaaaacggctctgcgccaactcaccgacaatgcacgacagtttggagctggtgctctt
ttcaatcagattctaccgttactaatggaaaaaacattggaggatcaagaacgtcatttg
ctcgttaaagtcattgatcgtgttctgtataagcttgatgaccttgttcggccatacgtc
cataagatccttgttgtcattgagccgctccttatcgatcaagactactacgcccgtgtg
gagggcagggaaattatctcgaatcttagtaaagctgccgggcttgctcatatgatcagt
actatgcgccctgatattgatcatgtcgacgagtacgtccgaaacaccacagcacgagca
ttcgccgtggtggcttccgccctgggaatcccagccttgcttcctttcctaagagctgtt
tgccgaagtaagaagtcatggcaagcccgacatacaggtgttaagatcgtgcaacagatt
cccattcttatgggttgtgcggttctgccgcatctgcaaggcttggtagactgcattggg
ccaaatctcagtgacgaacaagccaaagtccggactgtaaccagtttagctattgctgct
ctcgcagaagccgctaatccctatggtatcgagagtttccaggacatccttggcccgttg
tggatgggtgcccgaaagcagcgtggtaaaggccttgcaggtttccttaaggctgttggg
tacatcattcctctcatggatgaagagggtgcaaactactttacgagccaaatcatggaa
ataatcctgcgagagttctcttccccggatgaagaaatgaaaaaggtagttttgaaggtc
gtgtctcagtgtgcaggtacggacggtgttacagcagcttatctcaaagagcatgtactc
caagattttttcaaatgcttctgggtgagacgtatggctctcgataggaggaatttccgc
caggttgttgaaaccactgtcgatttgggacagaaagttggcgtcagtgagatattggag
aagattgtcaacaacctaaaggatgaaagtgagccatatcgaaaaatgacaatcgaaacg
atcgagaagcttattgcatctcttggagctgcggatattggcgaaaggttggaggagaga
ctgatcgatggcgtgcttttcgcattccaagaacaaagcgtcgaagatatcatcatcctg
aacgggtttggaacagttgtcaatgcccttggaacccgttgcaagccttaccttcctcag
attgttagcacaatcttatggcggctcaacaacaaatccgcaacagttcgtcaacaagca
gcagaccttatctcccgcattgcaatggttatgaagcagtgcggagaagacgccttaatg
ggtaaattaggcactttcctttacgaataccttggcgaagaataccctgaggtacttggg
tcgatccttggtgccttgcgttctattgtcaccgtcgtcggtatcaaccagatgcaacct
ccgatcagagatcttctaccgcggcttacgcccatccttcgaaatcgacacgaaaaagta
caggagaataccatcgaccttgtcggtcgtatcgccgatagaggtccagagtcggtcaat
gcacgtgaatggatgcgtatttgtttcgaattacttgacatgcttaaagctcacaagaaa
ggcattcgtcgagcggctaacaacacatttggtttcatcgcaaaagcaatcggcccgcaa
gacgtgttggcaactttacttaacaatctccgtgttcaagaacgtcaatcacgcgtgtgc
acagctgttgccattggtattgttgccgaaacctgtgcaccgttcacagtcttgccagct
cttatgaatgaataccgtgtgcctgaattaaatgtgcaaaacggtgttcttaaagccatg
tccttcctcttcgaatatattggcgaaatggccaaagattacgtttacgctgtcacacca
cttctggaagacgcgctcattgatcgtgaccaagtccatcggcaaacagctgccagtgtc
gtcaagcatatcgctttaggtgtcgttggcttgggatgtgaggacgccatggtccatctt
ctcaatctcctatatccaaaccttttcgaaacgagtccccacgtcattgaccgtattatc
gaggccattgaagcgattcgcatggccgtcgggagcggcatcgtgatgaattatgtttgg
gctgggttgttccatccggcgcgtaaagtgcgcacgccgtactggagattgtacaacgac
gcctacgtccagggtgcggattcgatgattccatattatccgtacttaccggatgaaggg
ttggcgagaagtgaattagcgattgttctctga

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